RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 HRO43593 1189 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 TSPAN6O43657 245 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 BANF1O75531 89 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 FGF1P05230 155 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 ALPIP09923 528 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 MAGEA4P43358 317 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 PMS2P54278 862 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 PTPN5P54829 565 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 SESN2P58004 480 aaPredicted RBP20.74■□□□□ 0.91
RTCA-201ENST00000260563 SLC1A5Q15758 541 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 QPCTQ16769 361 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 DENND5AQ6IQ26 1287 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 DPPA4Q7L190 304 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 SLC25A41Q8N5S1 370 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 CXorf40AQ8TE69 158 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 SCRN2Q96FV2 425 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 MCCC1Q96RQ3 725 aaPredicted RBP20.74■□□□□ 0.91
RTCA-201ENST00000260563 IRF2BPLQ9H1B7 796 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 B4GALT6Q9UBX8 382 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 HCN4Q9Y3Q4 1203 aa20.74■□□□□ 0.91
RTCA-201ENST00000260563 ATXN1LP0C7T5 689 aaKnown RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 SIRPB2Q5JXA9 342 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 HP1BP3Q5SSJ5 553 aaPredicted RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 KIAA1161Q6NSJ0 714 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 NEK5Q6P3R8 708 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 MREGQ8N565 214 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 PCED1AQ9H1Q7 454 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 CDC42EP4Q9H3Q1 356 aaKnown RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 C6orf106Q9H6K1 298 aaPredicted RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 ARNT2Q9HBZ2 717 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 BFARQ9NZS9 450 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 R4GN57 208 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 DMDP11532 3685 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 NPIPB15A6NHN6 443 aaPredicted RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 SDR42E2A6NKP2 422 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 RNGTTO60942 597 aaKnown RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 MGAT1P26572 445 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 VIPR1P32241 457 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 CHRNA4P43681 627 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 NPY2RP49146 381 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 PPP2CBP62714 309 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 PPP2CAP67775 309 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 SEMG2Q02383 582 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 FASTKD3Q14CZ7 662 aaKnown RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 TMEM52BQ4KMG9 183 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 LPCAT2Q7L5N7 544 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 TRIM69Q86WT6 500 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 ANKMY2Q8IV38 441 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 AGGF1Q8N302 714 aaeCLIP20.73■□□□□ 0.91
RTCA-201ENST00000260563 FBXO36Q8NEA4 188 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 CADM4Q8NFZ8 388 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 LRRC39Q96DD0 335 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 SIGLEC10Q96LC7 697 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 WRAP53Q9BUR4 548 aaKnown RBP20.73■□□□□ 0.91
RTCA-201ENST00000260563 TEX264Q9Y6I9 313 aa20.73■□□□□ 0.91
RTCA-201ENST00000260563 MYO15AQ9UKN7 3530 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 ELFN1P0C7U0 828 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 HNF1BP35680 557 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 ELK3P41970 407 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 RPS21P63220 83 aaKnown RBP20.72■□□□□ 0.91
RTCA-201ENST00000260563 RALGDSQ12967 914 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 ARHGEF7Q14155 803 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 SIM2Q14190 667 aaPredicted RBP20.72■□□□□ 0.91
RTCA-201ENST00000260563 CCDC38Q502W7 563 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 PMS2CLQ68D20 193 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 KIAA0895LQ68EN5 471 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 PRR23BQ6ZRT6 265 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 TRMT10CQ7L0Y3 403 aaKnown RBP20.72■□□□□ 0.91
RTCA-201ENST00000260563 TMEFF1Q8IYR6 380 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 MPP5Q8N3R9 675 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 PYROXD1Q8WU10 500 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 FOXJ1Q92949 421 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 C9orf72Q96LT7 481 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 LYSMD1Q96S90 227 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 WDR83Q9BRX9 315 aaKnown RBP20.72■□□□□ 0.91
RTCA-201ENST00000260563 SEMA4AQ9H3S1 761 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 CHMP2BQ9UQN3 213 aa20.72■□□□□ 0.91
RTCA-201ENST00000260563 A0A1W2PQU0 124 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 MEI4A8MW99 385 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 A8MX80 341 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 FSBPO95073 299 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 TPH1P17752 444 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 PLK5Q496M5 336 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 SPDYCQ5MJ68 293 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 HORMAD1Q86X24 394 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 DEFB119Q8N690 84 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 UBLCP1Q8WVY7 318 aaPredicted RBP20.71■□□□□ 0.91
RTCA-201ENST00000260563 SNX19Q92543 992 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 HSPA12BQ96MM6 686 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 SMIM14Q96QK8 99 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 SRPK1Q96SB4 655 aaKnown RBP20.71■□□□□ 0.91
RTCA-201ENST00000260563 IL22Q9GZX6 179 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 DUSP15Q9H1R2 295 aaPredicted RBP20.71■□□□□ 0.91
RTCA-201ENST00000260563 SYBUQ9NX95 663 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 NINJ2Q9NZG7 142 aa20.71■□□□□ 0.91
RTCA-201ENST00000260563 ZNF106Q9H2Y7 1883 aaKnown RBP20.71■□□□□ 0.91
RTCA-201ENST00000260563 TP53BP1Q12888 1972 aaPredicted RBP20.7■□□□□ 0.9
RTCA-201ENST00000260563 RHOBTB1O94844 696 aa20.7■□□□□ 0.9
RTCA-201ENST00000260563 ZNF30P17039 623 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms