RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 DNM1P34Q6PK57 102 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ENPP6Q6UWR7 440 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CASP12Q6UXS9 341 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CERS6Q6ZMG9 384 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ABHD12BQ7Z5M8 362 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 ADAMTSL2Q86TH1 951 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 DHX40Q8IX18 779 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 ZNF100Q8IYN0 542 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CCDC197Q8NCU1 140 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SHC3Q92529 594 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 NXPE2Q96DL1 559 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CASD1Q96PB1 797 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RUSC1Q9BVN2 902 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 GPR174Q9BXC1 333 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ZCWPW1Q9H0M4 648 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RANBP17Q9H2T7 1088 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 PLEKHA1Q9HB21 404 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 TIMMDC1Q9NPL8 285 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RASSF1Q9NS23 344 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CATSPERZQ9NTU4 200 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 DDX18Q9NVP1 670 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 KLRF1Q9NZS2 232 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 TMEM216Q9P0N5 145 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SORCS3Q9UPU3 1222 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ANGPT4Q9Y264 503 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ACOT9Q9Y305 439 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CLIC4Q9Y696 253 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 COL5A2P05997 1499 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 NWD1Q149M9 1564 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ATRNO75882 1429 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CCT8L1PA6NM43 557 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 LGALS16A8MUM7 142 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MYO1CO00159 1063 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ERAL1O75616 437 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 FGF1P05230 155 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MMEP08473 750 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ENO3P13929 434 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 MAGEA10P43363 369 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 CXCR3P49682 368 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SRP54P61011 504 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 ZNF200P98182 395 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 SEMG2Q02383 582 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MCL1Q07820 350 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 IL18R1Q13478 541 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 INTS6LQ5JSJ4 861 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 TOR1AIP1Q5JTV8 583 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 TAPT1Q6NXT6 567 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 GDPD4Q6W3E5 623 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CYB5R4Q7L1T6 521 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ZNF720Q7Z2F6 126 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 GRASPQ7Z6J2 395 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 PRSS58Q8IYP2 241 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CACTIN-AS1Q8N1I8 211 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CLEC4FQ8N1N0 589 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 FBXO39Q8N4B4 442 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 TC2NQ8N9U0 490 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 DAGLBQ8NCG7 672 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MAGEB18Q96M61 343 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 C12orf66Q96MD2 445 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PTCHD1Q96NR3 888 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SH2D3AQ9BRG2 576 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 YIPF4Q9BSR8 244 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 HDHD5Q9BXW7 423 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PORCNQ9H237 461 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 OSBPL3Q9H4L5 887 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MED4Q9NPJ6 270 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CISHQ9NSE2 258 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ARL8BQ9NVJ2 186 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 EPHA6Q9UF33 1036 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 DMGDHQ9UI17 866 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 SMG5Q9UPR3 1016 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 PCDHGB1Q9Y5G3 927 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 SHROOM2Q13796 1616 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 GCC2Q8IWJ2 1684 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 H3BQ06 376 aaPredicted RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 FZD9O00144 591 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PSTPIP1O43586 416 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CDC40O60508 579 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNF38-201ENST00000259605 ADAMTS4O75173 837 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 IPO13O94829 963 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 C22orf31O95567 290 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CLIC3O95833 236 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 CSF2RAP15509 400 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 WARSP23381 471 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 CRABP2P29373 138 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 NTSR1P30989 418 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 DNAJA1P31689 397 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 S100A5P33763 92 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PRCPP42785 496 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 MECP2P51608 486 aaKnown RBP4.04□□□□□ -1.76
RNF38-201ENST00000259605 CACNA2D1P54289 1103 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PTENP60484 403 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 TGFBR3Q03167 851 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 PWP1Q13610 501 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ATP6AP1LQ52LC2 224 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 UBXN11Q5T124 520 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 C20orf194Q5TEA3 1177 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 ARHGAP17Q68EM7 881 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 FOXR2Q6PJQ5 311 aa4.04□□□□□ -1.76
RNF38-201ENST00000259605 RASGRP2Q7LDG7 609 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms