RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ARF5P84085 180 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 RELQ04864 619 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 DUSP6Q16828 381 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PYDC2Q56P42 97 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLX4IPQ5VYV7 408 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ARFGAP1Q8N6T3 406 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MCPH1Q8NEM0 835 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 OR52K1Q8NGK4 314 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM216AQ8WUB2 273 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ST8SIA4Q92187 359 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 USP7Q93009 1102 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 P2RX5Q93086 422 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 APOPT1Q96IL0 206 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF597Q96LX8 424 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 DHX33Q9H6R0 707 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 DDX43Q9NXZ2 648 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 GRHL1Q9NZI5 618 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 RIMKLBQ9ULI2 386 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MRPL42Q9Y6G3 142 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 M0R233 179 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 CHP2O43745 196 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PLOD3O60568 738 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MMP1P03956 469 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SPARCP09486 303 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SERPINF1P36955 418 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC26A2P50443 739 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 DGCR6Q14129 220 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PPP2R5DQ14738 602 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SPCS2Q15005 226 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 TBC1D10CQ8IV04 446 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF283Q8N7M2 679 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ACTRT1Q8TDG2 376 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC13A3Q8WWT9 602 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ING5Q8WYH8 240 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 AHCYL2Q96HN2 611 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 CLPTM1LQ96KA5 538 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 AGO2Q9UKV8 859 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 LOC100506127A0A0U1RQW1 187 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PTGES3LE9PB15 166 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 DENRO43583 198 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 TDP2O95551 362 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 VEGFCP49767 419 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC3A1Q07837 685 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 TRAM2Q15035 370 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 BTBD8Q5XKL5 378 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 RAET1GQ6H3X3 334 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 LHFPL3Q86UP9 236 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SMYD4Q8IYR2 804 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 BHLHE22Q8NFJ8 381 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 GRIN3AQ8TCU5 1115 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 AP3S1Q92572 193 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PPP1R14AQ96A00 147 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 CELF4Q9BZC1 486 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ASB4Q9Y574 426 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 A8MV72 311 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 BET1O15155 118 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MITFO75030 526 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 CDC25AP30304 524 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 HOXC13P31276 330 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 RAB13P51153 203 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 SKP1P63208 163 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 KCNJ10P78508 379 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ALG11Q2TAA5 492 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 LCN1P1Q5VSP4 162 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM171A1Q5VUB5 890 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 IZUMO3Q5VZ72 239 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 RPL13AP3Q6NVV1 102 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF551Q7Z340 670 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM84BQ96KN1 310 aaPredicted RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 FRMD6Q96NE9 622 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 YTHDF1Q9BYJ9 559 aaKnown RBP6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ABCB9Q9NP78 766 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 DUSP22Q9NRW4 184 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 ANAPC2Q9UJX6 822 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 UGT2A1Q9Y4X1 527 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MAU2Q9Y6X3 613 aa6.76□□□□□ -1.33
PDGFRA-201ENST00000257290 MED1Q15648 1581 aaPredicted RBP6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 A6NCN8 305 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 TOR1BO14657 336 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAM10O14672 748 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 AP2A2O94973 939 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 SERPINA1P01009 418 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 TSPAN19P0C672 248 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 THRBP10828 461 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 STAT5AP42229 794 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 STAT5BP51692 787 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 PRKCZQ05513 592 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 GRTP1Q5TC63 336 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 FBXO11Q86XK2 927 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 FOXP4Q8IVH2 680 aaPredicted RBP6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 THNSL1Q8IYQ7 743 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 Q8N9G6 341 aaPredicted RBP6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 OR6S1Q8NH40 331 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 REPS1Q96D71 796 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 FAM111AQ96PZ2 611 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 BDH2Q9BUT1 245 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 GPR63Q9BZJ6 419 aa6.75□□□□□ -1.33
PDGFRA-201ENST00000257290 ARNT2Q9HBZ2 717 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms