RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 SRPRAP08240 638 aaKnown RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 PIGAP37287 484 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 MRPL12P52815 198 aaKnown RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 MFAP4P55083 255 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 ADORA2A-AS1P86434 159 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 ACSM2AQ08AH3 577 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 KLF9Q13886 244 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 PCLAFQ15004 111 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 MTX3Q5HYI7 312 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 LRIF1Q5T3J3 769 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 ACSM2BQ68CK6 577 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 DLK2Q6UY11 383 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 Q6ZSV7 163 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 TRAPPC11Q7Z392 1133 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 TSPAN33Q86UF1 283 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 TEX11Q8IYF3 940 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 MMP21Q8N119 569 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 SCCPDHQ8NBX0 429 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 ZNF548Q8NEK5 533 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 JAKMIP2Q96AA8 810 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 SLC22A18Q96BI1 424 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 IFIH1Q9BYX4 1025 aaKnown RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 DECR2Q9NUI1 292 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 NFKBIL1Q9UBC1 381 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 SEC63Q9UGP8 760 aaKnown RBP4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 ERVK-11Q9UQG0 969 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 ZNF804BA4D1E1 1349 aa4.41□□□□□ -1.7
HMGB1P5-201ENST00000255320 LY6G6EA0A0G2JKS1 128 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 C1orf226A1L170 272 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 A8MV72 311 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 J3KR12 359 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 TIMM23O14925 209 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 MAOAP21397 527 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 NRIP1P48552 1158 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 HSD17B4P51659 736 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 TAS2R40P59535 323 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZBED6P86452 979 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ST3GAL1Q11201 340 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 TRAF1Q13077 416 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 MYBPC2Q14324 1141 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 HNF4GQ14541 408 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 SRSF7Q16629 238 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZSCAN23Q3MJ62 389 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 DCAF6Q58WW2 860 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 DCAF12L2Q5VW00 463 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 RPUSD3Q6P087 351 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 CTU1Q7Z7A3 348 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 KBTBD6Q86V97 674 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 C7orf57Q8NEG2 295 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 AGBL3Q8NEM8 1001 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 LPAR1Q92633 364 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 VCPIP1Q96JH7 1222 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZNF570Q96NI8 536 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 GFM1Q96RP9 751 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ABHD1Q96SE0 405 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 FIZ1Q96SL8 496 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ACOX2Q99424 681 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 NCAPGQ9BPX3 1015 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 TEX12Q9BXU0 123 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 ISCUQ9H1K1 167 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 KCNN2Q9H2S1 579 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 KRCC1Q9NPI7 259 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 HINT3Q9NQE9 182 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 TMEM51Q9NW97 253 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 CWC15Q9P013 229 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 MRPL15Q9P015 296 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 PTGFRNQ9P2B2 879 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 SRPRBQ9Y5M8 271 aaKnown RBP4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 HS3ST3B1Q9Y662 390 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 CLIC4Q9Y696 253 aa4.4□□□□□ -1.71
HMGB1P5-201ENST00000255320 GLOD5A6NK44 160 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 KDM4EB2RXH2 506 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 H0YGN5 161 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 WNT9BO14905 357 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 ATP2A1O14983 1001 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZC3H11AO75152 810 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 JRKO75564 520 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 SOX30O94993 753 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 CSPG5O95196 566 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 LCATP04180 440 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 ARSBP15848 533 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 TMEM11P17152 192 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 GPTP24298 496 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 CD38P28907 300 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 EIF2S3P41091 472 aaKnown RBP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 NANOS3P60323 173 aaKnown RBP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZP1P60852 638 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 MRPS34P82930 218 aaKnown RBP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 TFAP4Q01664 338 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 LRMPQ12912 555 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 CTTNQ14247 550 aaKnown RBP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 PTGR1Q14914 329 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 NAB2Q15742 525 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 NTRK2Q16620 822 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 SMN1Q16637 294 aaKnown RBP4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 BMP2KLQ5H9B9 411 aa4.39□□□□□ -1.71
HMGB1P5-201ENST00000255320 WASHC2DQ5SRD0 308 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms