RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 OR7D4Q8NG98 312 aa21.33■■□□□ 1.01
TRIM28-201ENST00000253024 SMOC2Q9H3U7 446 aa21.33■■□□□ 1.01
TRIM28-201ENST00000253024 Q9H521 79 aa21.33■■□□□ 1.01
TRIM28-201ENST00000253024 CCSER2Q9H7U1 834 aa21.33■■□□□ 1.01
TRIM28-201ENST00000253024 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.33■■□□□ 1.01
TRIM28-201ENST00000253024 CROTQ9UKG9 612 aa21.33■■□□□ 1.01
TRIM28-201ENST00000253024 GIT1Q9Y2X7 761 aa21.33■■□□□ 1.01
TRIM28-201ENST00000253024 SLCO1B7G3V0H7 640 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 SRP72O76094 671 aaKnown RBP21.33■■□□□ 1
TRIM28-201ENST00000253024 PEX11BO96011 259 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 MYCP01106 439 aaPredicted RBP21.33■■□□□ 1
TRIM28-201ENST00000253024 PABPC4LP0CB38 370 aaKnown RBP21.33■■□□□ 1
TRIM28-201ENST00000253024 STX1BP61266 288 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 POLD3Q15054 466 aaPredicted RBP21.33■■□□□ 1
TRIM28-201ENST00000253024 AAK1Q2M2I8 961 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 PELI3Q8N2H9 469 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 TRIML2Q8N7C3 387 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 HAPLN3Q96S86 360 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 SLC25A51Q9H1U9 297 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 SPAG4Q9NPE6 437 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 SLAMF8Q9P0V8 285 aa21.33■■□□□ 1
TRIM28-201ENST00000253024 TNFRSF10BO14763 440 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 NPHS1O60500 1241 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 IGLV3-25P01717 112 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 ASGR1P07306 291 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 SCNN1BP51168 640 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 RENBPP51606 427 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 RABL3Q5HYI8 236 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 SETD3Q86TU7 594 aaPredicted RBP21.32■■□□□ 1
TRIM28-201ENST00000253024 CNOT6Q9ULM6 557 aaKnown RBP21.32■■□□□ 1
TRIM28-201ENST00000253024 GABRQQ9UN88 632 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 RNF11Q9Y3C5 154 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 NYNRINQ9P2P1 1898 aaKnown RBP21.32■■□□□ 1
TRIM28-201ENST00000253024 IQCF5A8MTL0 148 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 SOCS2O14508 198 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 GPR182O15218 404 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 PSMD3O43242 534 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 SLC2A3P11169 496 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 HGFP14210 728 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 STX5Q13190 355 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 TUSC3Q13454 348 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 HMBOX1Q6NT76 420 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 PRICKLE1Q96MT3 831 aaPredicted RBP21.32■■□□□ 1
TRIM28-201ENST00000253024 TMEM74Q96NL1 305 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 CCT7Q99832 543 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 EML4Q9HC35 981 aaKnown RBP21.32■■□□□ 1
TRIM28-201ENST00000253024 TBC1D13Q9NVG8 400 aa21.32■■□□□ 1
TRIM28-201ENST00000253024 UNC80Q8N2C7 3258 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 CDH23Q9H251 3354 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ARHGAP10A1A4S6 786 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 FGF10O15520 208 aaPredicted RBP21.31■■□□□ 1
TRIM28-201ENST00000253024 COL6A2P12110 1019 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 GRM2Q14416 872 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ZNF678Q5SXM1 525 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 MANEALQ5VSG8 457 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 TIGD7Q6NT04 549 aaPredicted RBP21.31■■□□□ 1
TRIM28-201ENST00000253024 ZBTB49Q6ZSB9 765 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 CHST15Q7LFX5 561 aaPredicted RBP21.31■■□□□ 1
TRIM28-201ENST00000253024 OFCC1Q8IZS5 231 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 IMP4Q96G21 291 aaKnown RBP21.31■■□□□ 1
TRIM28-201ENST00000253024 TEX37Q96LM6 180 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 BTBD9Q96Q07 612 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 CDC7O00311 574 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 CACNG3O60359 315 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 CDK14O94921 469 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 AKR1A1P14550 325 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ZNF26P17031 533 aaPredicted RBP21.31■■□□□ 1
TRIM28-201ENST00000253024 CAPN3P20807 821 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ZNF235Q14590 738 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 LPIN1Q14693 890 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ARTNQ5T4W7 220 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 PAQR3Q6TCH7 311 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 CPNE9Q8IYJ1 553 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 MARVELD2Q8N4S9 558 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 FBXO32Q969P5 355 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ASB9Q96DX5 294 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 HIC2Q96JB3 615 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 ZYG11BQ9C0D3 744 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 C5orf42Q9H799 3197 aa21.31■■□□□ 1
TRIM28-201ENST00000253024 HNRNPRO43390 633 aaKnown RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 OXTRP30559 389 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 TAF10Q12962 218 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 LAMB3Q13751 1172 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 TSNQ15631 228 aaKnown RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 FAM47BQ8NA70 645 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 TWIST2Q8WVJ9 160 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 MAELQ96JY0 434 aaKnown RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 SEPHS2Q99611 448 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 MTG1Q9BT17 334 aaPredicted RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 UNC93B1Q9H1C4 597 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 RRAGCQ9HB90 399 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 CD3EAPO15446 510 aaKnown RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 OR1I1O60431 355 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 RAMP2O60895 175 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 GLP2RO95838 553 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 ITGB6P18564 788 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 RPL9P32969 192 aaKnown RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 RPL5P46777 297 aaKnown RBP21.3■■□□□ 1
TRIM28-201ENST00000253024 BRMS1LQ5PSV4 323 aa21.3■■□□□ 1
TRIM28-201ENST00000253024 C6orf10Q5SRN2 563 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms