RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NOD2Q9HC29 1040 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 EPB41L5Q9HCM4 733 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 PHPT1Q9NRX4 125 aaPredicted RBP21.09■□□□□ 0.97
NEDD8-201ENST00000250495 IP6K2Q9UHH9 426 aa21.09■□□□□ 0.97
NEDD8-201ENST00000250495 A0A1W2PQJ5 194 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 CAPN8A6NHC0 703 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 HEXIM1O94992 359 aaKnown RBP21.08■□□□□ 0.97
NEDD8-201ENST00000250495 MYCLP1P12525 358 aaPredicted RBP21.08■□□□□ 0.97
NEDD8-201ENST00000250495 TCF4P15884 667 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 CNGA3Q16281 694 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 C14orf28Q4W4Y0 310 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 CERCAMQ5T4B2 595 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 HGSNATQ68CP4 663 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 B3GNT8Q7Z7M8 397 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 LRRC49Q8IUZ0 686 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 CCNJLQ8IV13 435 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 CBARPQ8N350 705 aaPredicted RBP21.08■□□□□ 0.97
NEDD8-201ENST00000250495 PGBD5Q8N414 524 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 NIPA2Q8N8Q9 360 aa21.08■□□□□ 0.97
NEDD8-201ENST00000250495 SNRNP27Q8WVK2 155 aaKnown RBP21.08■□□□□ 0.97
NEDD8-201ENST00000250495 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.08■□□□□ 0.97
NEDD8-201ENST00000250495 PRSS38A1L453 326 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 PMS2P1A4D2B8 440 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 PSMD11O00231 422 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 NOBOXO60393 691 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 SERPING1P05155 500 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 CCKBRP32239 447 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 MMP13P45452 471 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 ARHGEF7Q14155 803 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 KRT81Q14533 505 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 DENND2CQ68D51 928 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 NDUFAF2Q8N183 169 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 PELI3Q8N2H9 469 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 Q8N9G6 341 aaPredicted RBP21.07■□□□□ 0.96
NEDD8-201ENST00000250495 KIAA1524Q8TCG1 905 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 SCRN2Q96FV2 425 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 TEX101Q9BY14 249 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 FOXP3Q9BZS1 431 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 THAP2Q9H0W7 228 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 PCDH18Q9HCL0 1135 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 RCOR3Q9P2K3 495 aaPredicted RBP21.07■□□□□ 0.96
NEDD8-201ENST00000250495 LRIT1Q9P2V4 623 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 ANAPC7Q9UJX3 599 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 PCDHGA7Q9Y5G6 932 aa21.07■□□□□ 0.96
NEDD8-201ENST00000250495 ARHGEF17Q96PE2 2063 aaPredicted RBP21.06■□□□□ 0.96
NEDD8-201ENST00000250495 MYO1FO00160 1098 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 NUDT21O43809 227 aaKnown RBP21.06■□□□□ 0.96
NEDD8-201ENST00000250495 C1QL1O75973 258 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 KRT10P13645 584 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 UGT1A5P35504 534 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 MAXP61244 160 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 FANCCQ00597 558 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 CFHR1Q03591 330 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 TRAF2Q12933 501 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 HLTFQ14527 1009 aaKnown RBP eCLIP21.06■□□□□ 0.96
NEDD8-201ENST00000250495 ARMC12Q5T9G4 340 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 SPECC1LQ69YQ0 1117 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 TXNRD3NBQ6F5E7 133 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 CCL4L1Q8NHW4 92 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 IQCDQ96DY2 449 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 DTD2Q96FN9 168 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 FUCA2Q9BTY2 467 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 NUP85Q9BW27 656 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 GSDMCQ9BYG8 508 aa21.06■□□□□ 0.96
NEDD8-201ENST00000250495 CARS2Q9HA77 564 aaKnown RBP21.06■□□□□ 0.96
NEDD8-201ENST00000250495 B4DGG1 531 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 PGLSO95336 258 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 CCNB1P14635 433 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 TEAD1P28347 426 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 ETV3P41162 512 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 UBASH3AP57075 661 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 ZBED6P86452 979 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 SLC25A11Q02978 314 aaKnown RBP21.05■□□□□ 0.96
NEDD8-201ENST00000250495 HADHQ16836 314 aaKnown RBP21.05■□□□□ 0.96
NEDD8-201ENST00000250495 CCDC122Q5T0U0 273 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 PCSK4Q6UW60 755 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 CCDC81Q6ZN84 652 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 USP45Q70EL2 814 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 HEATR4Q86WZ0 1026 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 GPBAR1Q8TDU6 330 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 TMEM159Q96B96 161 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 BTBD6Q96KE9 485 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 TRNAU1APQ9NX07 287 aaKnown RBP21.05■□□□□ 0.96
NEDD8-201ENST00000250495 PPIL1Q9Y3C6 166 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 RNF215Q9Y6U7 377 aa21.05■□□□□ 0.96
NEDD8-201ENST00000250495 K7ENP7 123 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 ZW10O43264 779 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 CYP1A2P05177 515 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 CEACAM5P06731 702 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 JMJD7P0C870 316 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 IL4RP24394 825 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 SLC5A2P31639 672 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 PBX1P40424 430 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 SSR1P43307 286 aaKnown RBP21.04■□□□□ 0.96
NEDD8-201ENST00000250495 ZFP36L1Q07352 338 aaKnown RBP21.04■□□□□ 0.96
NEDD8-201ENST00000250495 ILF3Q12906 894 aaKnown RBP eCLIP21.04■□□□□ 0.963e-7■■□□□ 13.3
NEDD8-201ENST00000250495 CLN3Q13286 438 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 PEX6Q13608 980 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 INO80CQ6PI98 192 aaPredicted RBP21.04■□□□□ 0.96
NEDD8-201ENST00000250495 HSD11B1LQ7Z5J1 315 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms