RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 SIK2Q9H0K1 926 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 PCDHAC1Q9H158 963 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 WDCPQ9H6R7 721 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 PFDN1O60925 122 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 CCDC166P0CW27 439 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 TRIML2Q8N7C3 387 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 NXNL1Q96CM4 212 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 GPR78Q96P69 363 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 KIFC1Q9BW19 673 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 BRD8Q9H0E9 1235 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 GTSE1Q9NYZ3 720 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 FBXW11Q9UKB1 542 aa17.03■□□□□ 0.32
FOXA1-201ENST00000250448 TBC1D4O60343 1298 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 AHSGP02765 367 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 ALDH3B2P48448 385 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 RAB10P61026 200 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 GPR17Q13304 367 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 PSMD5Q16401 504 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 NAPEPLDQ6IQ20 393 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 C16orf59Q7L2K0 433 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 NTAN1Q96AB6 310 aa17.02■□□□□ 0.32
FOXA1-201ENST00000250448 FUBP3Q96I24 572 aaKnown RBP eCLIP17.02■□□□□ 0.323e-9■■□□□ 11.6
FOXA1-201ENST00000250448 PATJQ8NI35 1801 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 ABHD14A-ACY1A0A1B0GW23 586 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 H6PDO95479 791 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 MOCS2O96007 188 aaPredicted RBP17.02■□□□□ 0.31
FOXA1-201ENST00000250448 EMP3P54852 163 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 MPP1Q00013 466 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 RHDQ02161 417 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 GALNT2Q10471 571 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 ELAVL2Q12926 359 aaKnown RBP17.02■□□□□ 0.31
FOXA1-201ENST00000250448 MAPRE2Q15555 327 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 UGP2Q16851 508 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 ANKS3Q6ZW76 656 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 TXNDC5Q8NBS9 432 aaKnown RBP17.02■□□□□ 0.31
FOXA1-201ENST00000250448 ZNF512Q96ME7 567 aaPredicted RBP17.02■□□□□ 0.31
FOXA1-201ENST00000250448 SLC9A7Q96T83 725 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 OMDQ99983 421 aa17.02■□□□□ 0.31
FOXA1-201ENST00000250448 DNAAF2Q9NVR5 837 aaKnown RBP17.02■□□□□ 0.31
FOXA1-201ENST00000250448 NUP205Q92621 2012 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 FAM95CA0A1B0GW59 222 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 HEATR9A2RTY3 570 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 AIF1P55008 147 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 SCAPQ12770 1279 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 MTX3Q5HYI7 312 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 REP15Q6BDI9 236 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 PIWIL4Q7Z3Z4 852 aaKnown RBP17.01■□□□□ 0.31
FOXA1-201ENST00000250448 CEP97Q8IW35 865 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 SPATA6LQ8N4H0 392 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 HMGCLL1Q8TB92 370 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 VAT1Q99536 393 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 UNKQ9C0B0 810 aaKnown RBP17.01■□□□□ 0.31
FOXA1-201ENST00000250448 MRPL46Q9H2W6 279 aaKnown RBP17.01■□□□□ 0.31
FOXA1-201ENST00000250448 CACNA2D2Q9NY47 1150 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 NCKIPSDQ9NZQ3 722 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 H3BNH8 94 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 KIAA0355O15063 1070 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 TRIM24O15164 1050 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 STMN1P16949 149 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 CDK9P50750 372 aaKnown RBP17.01■□□□□ 0.31
FOXA1-201ENST00000250448 ADARP55265 1226 aaKnown RBP17.01■□□□□ 0.31
FOXA1-201ENST00000250448 RALGDSQ12967 914 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 STX5Q13190 355 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 SQLEQ14534 574 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 PRPSAP1Q14558 356 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 CNSTQ6PJW8 725 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 MFSD6LQ8IWD5 586 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 LPGAT1Q92604 370 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 C8orf48Q96LL4 319 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 TEKT5Q96M29 485 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 YME1L1Q96TA2 773 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 ARPC5LQ9BPX5 153 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 TMEM79Q9BSE2 394 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 POMKQ9H5K3 350 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 TRPC7Q9HCX4 862 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 PNPLA3Q9NST1 481 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 RHBDL2Q9NX52 303 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 SARDHQ9UL12 918 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 FIS1Q9Y3D6 152 aa17.01■□□□□ 0.31
FOXA1-201ENST00000250448 PDE4DIPQ5VU43 2346 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 MYO7AQ13402 2215 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 AP3B1O00203 1094 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 NELFEP18615 380 aaKnown RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 HCAR3P49019 387 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 CXCR3P49682 368 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 TRAP1Q12931 704 aaKnown RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 TAF10Q12962 218 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 LRP8Q14114 963 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 KRT80Q6KB66 452 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 CHSY3Q70JA7 882 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 ERI1Q8IV48 349 aaKnown RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 HERC6Q8IVU3 1022 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 DENND6AQ8IWF6 608 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 TMEM199Q8N511 208 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 FBXO32Q969P5 355 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 SLCO4A1Q96BD0 722 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 TMIGD2Q96BF3 282 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 ZNF689Q96CS4 500 aaPredicted RBP17■□□□□ 0.31
FOXA1-201ENST00000250448 SGF29Q96ES7 293 aa17■□□□□ 0.31
FOXA1-201ENST00000250448 OSBPL2Q9H1P3 480 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms