RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SRPRAP08240 638 aaKnown RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 GSTA1P08263 222 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 SLC35E2BP0CK96 405 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 LAMP2P13473 410 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 OGNP20774 298 aaKnown RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 SAT1P21673 171 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 HNF1BP35680 557 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 NNMTP40261 264 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 CLCN5P51795 746 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PGGT1BP53609 377 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 TAS2R39P59534 338 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 IRF9Q00978 393 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 ZKSCAN8Q15776 578 aaPredicted RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 CDKN3Q16667 212 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 TYSND1Q2T9J0 566 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 RBM20Q5T481 1227 aaKnown RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 N4BP2L1Q5TBK1 243 aaPredicted RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 C16orf46Q6P387 395 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 AFTPHQ6ULP2 937 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PIGWQ7Z7B1 504 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 CEP97Q8IW35 865 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 LRRC8CQ8TDW0 803 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 ZNF641Q96N77 438 aaPredicted RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 OMDQ99983 421 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 GPR63Q9BZJ6 419 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 ZDHHC6Q9H6R6 413 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 ZNF358Q9NW07 568 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 ELOVL2Q9NXB9 296 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 DEC1Q9P2X7 70 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PPIL1Q9Y3C6 166 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 CAPN8A6NHC0 703 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PRRT4C9JH25 899 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PHGDHO43175 533 aaKnown RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PRSS56P0CW18 603 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 STMN1P16949 149 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 SP100P23497 879 aaPredicted RBP15.22■□□□□ 0.03
HDHD3-201ENST00000238379 RAB10P61026 200 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 POU4F1Q01851 419 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 RAD51Q06609 339 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PAF1Q8N7H5 531 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 GPATCH11Q8N954 259 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 ELMO2Q96JJ3 720 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 LYSMD1Q96S90 227 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 NDNQ99608 321 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 BPIFA1Q9NP55 256 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 FKBPLQ9UIM3 349 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
HDHD3-201ENST00000238379 PROCP04070 461 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 UGT2B4P06133 528 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 LTBRP36941 435 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 RECQLP46063 649 aaPredicted RBP15.21■□□□□ 0.03
HDHD3-201ENST00000238379 STC1P52823 247 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 XIAPP98170 497 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 DMTNQ08495 405 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 PEX6Q13608 980 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 RUNX3Q13761 415 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 GRM2Q14416 872 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 GRAMD4Q6IC98 578 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 RAPH1Q70E73 1250 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 SDCCAG8Q86SQ7 713 aaPredicted RBP15.21■□□□□ 0.03
HDHD3-201ENST00000238379 PHTF2Q8N3S3 785 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 NXPE3Q969Y0 559 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 ELSPBP1Q96BH3 223 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 SCRN2Q96FV2 425 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 C19orf43Q9BQ61 176 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 MECRQ9BV79 373 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 C1QTNF1Q9BXJ1 281 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 NSRP1Q9H0G5 558 aaKnown RBP15.21■□□□□ 0.03
HDHD3-201ENST00000238379 MANSC1Q9H8J5 431 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 ZFYVE1Q9HBF4 777 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 SLCO1B3Q9NPD5 702 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 CLDND1Q9NY35 253 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 SIRPGQ9P1W8 387 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.21■□□□□ 0.03
HDHD3-201ENST00000238379 TLK1Q9UKI8 766 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 ANKRD6Q9Y2G4 727 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 PKP3Q9Y446 797 aa15.21■□□□□ 0.03
HDHD3-201ENST00000238379 C1orf232A0A0U1RR37 186 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 BIRC5O15392 142 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 BPGMP07738 259 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 PSMC3P17980 439 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CRABP2P29373 138 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 MC4RP32245 332 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 ILF2Q12905 390 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 ZNF460Q14592 562 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 FASTKD1Q53R41 847 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 TAF1BQ53T94 588 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 GKAP1Q5VSY0 366 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 PARM1Q6UWI2 310 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 GDPD4Q6W3E5 623 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 FAM47EQ6ZV65 393 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 LCA5Q86VQ0 697 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 CPA6Q8N4T0 437 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 SCG3Q8WXD2 468 aaKnown RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 FGF14Q92915 247 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 MSLNLQ96KJ4 702 aa15.2■□□□□ 0.02
HDHD3-201ENST00000238379 MCCC1Q96RQ3 725 aaPredicted RBP15.2■□□□□ 0.02
HDHD3-201ENST00000238379 TCF12Q99081 682 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms