RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 A0A1W2PQU0 124 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 INPP4BO15327 924 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 RNGTTO60942 597 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHRM3P20309 590 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 GRIA1P42261 906 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 LIG3P49916 1009 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 MGAT5Q09328 741 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 OLIG2Q13516 323 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 SYTL3Q4VX76 610 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 HSP90AA5PQ58FG0 334 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 PARS2Q7L3T8 475 aaKnown RBP11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 NAT8LQ8N9F0 302 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 FOXJ1Q92949 421 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 NEUROG2Q9H2A3 272 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 DKK3Q9UBP4 350 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 ARL5AQ9Y689 179 aa11.14□□□□□ -0.63
TNFAIP3-201ENST00000237289 PTPRDP23468 1912 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 RASGRF2O14827 1237 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 RPP40O75818 363 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMEM63AO94886 807 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 PAK4O96013 591 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 KCNJ11Q14654 390 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 LRRC14Q15048 493 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMED2Q15363 201 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 ZC3H14Q6PJT7 736 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 C11orf74Q86VG3 221 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TOE1Q96GM8 510 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 MRGPRX3Q96LB0 322 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 CDH19Q9H159 772 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TBK1Q9UHD2 729 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 GOLGA8KD6RF30 607 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 GOLGA8TH3BQL2 631 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 DYNC1I1O14576 645 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 SRP72O76094 671 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 CD6P30203 668 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 KIR2DL1P43626 348 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLCO1A2P46721 670 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 RPS14P62263 151 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC14A2Q15849 920 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSTD2Q5T7W7 516 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 ZNF470Q6ECI4 717 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 OR4L1Q8NH43 312 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 SCG3Q8WXD2 468 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 ULK4Q96C45 1275 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHRDQ9H2X0 955 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 PPM1HQ9ULR3 514 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TCRBV7S3A2A0A539 114 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 GJB3O75712 270 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 CTSEP14091 401 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 EIF3BP55884 814 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 MESP2Q0VG99 397 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 WDR93Q6P2C0 686 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 FBXL6Q8N531 539 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 OR2T34Q8NGX1 318 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 DNAJC1Q96KC8 554 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TBATAQ96M53 351 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC6A17Q9H1V8 727 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 RSPH9Q9H1X1 276 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMEM245Q9H330 911 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 CDC42EP4Q9H3Q1 356 aaKnown RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 CASS4Q9NQ75 786 aa11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 POLR3BQ9NW08 1133 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 MTF2Q9Y483 593 aaPredicted RBP11.13□□□□□ -0.63
TNFAIP3-201ENST00000237289 GSTA2P09210 222 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TIMP2P16035 220 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 SSTR1P30872 391 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 MTAPQ13126 283 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 KIAA1161Q6NSJ0 714 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TTC23LQ6PF05 361 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 MARK2Q7KZI7 788 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 LRRC6Q86X45 466 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 HCAR2Q8TDS4 363 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 DYDC1Q8WWB3 177 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 KCNK9Q9NPC2 374 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 CAPN8A6NHC0 703 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 ARNTLO00327 626 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 BANF1O75531 89 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 PRAMEF1O95521 474 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 NDUFV2P19404 249 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 ARL1P40616 181 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 CLCN5P51795 746 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 CCINQ13939 588 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TRADDQ15628 312 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 LYPLAL1Q5VWZ2 237 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 KDELC1Q6UW63 502 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 USP30Q70CQ3 517 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 KIAA0907Q7Z7F0 614 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 PPP1R14CQ8TAE6 165 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 FBF1Q8TES7 1133 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 ARRDC3Q96B67 414 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 MRGPRX1Q96LB2 322 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 COPS8Q99627 209 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 MKRN2Q9H000 416 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 ANKZF1Q9H8Y5 726 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 SDK1Q7Z5N4 2213 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms