RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 RPS7P62081 194 aaKnown RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 FAM92BQ6ZTR7 304 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 CHST15Q7LFX5 561 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 UBE2J2Q8N2K1 259 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 OR13J1Q8NGT2 312 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 NSUN4Q96CB9 384 aaKnown RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 SLC39A13Q96H72 371 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 COPS4Q9BT78 406 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 TRPM5Q9NZQ8 1165 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 CDV3Q9UKY7 258 aaKnown RBP12.89□□□□□ -0.35
VAMP4-201ENST00000236192 UBL4AP11441 157 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 KELP23276 732 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 SNAP25P60880 206 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 CPXCR1Q8N123 301 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 FAM83DQ9H4H8 585 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 LRRC4Q9HBW1 653 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 SOCS2O14508 198 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 PROZP22891 400 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 PRDX5P30044 214 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 NPY2RP49146 381 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 RORCP51449 518 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 EMP3P54852 163 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 CDH13P55290 713 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 IL18Q14116 193 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 TRPV3Q8NET8 790 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 TMIEQ8NEW7 156 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 ACDQ96AP0 544 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 SH2D3AQ9BRG2 576 aa12.89□□□□□ -0.35
VAMP4-201ENST00000236192 IL7RP16871 459 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CD72P21854 359 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 BDNFP23560 247 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 STAT5AP42229 794 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CTSKP43235 329 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 STAT5BP51692 787 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CDC42P60953 191 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 PPP3CAQ08209 521 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ZNF543Q08ER8 600 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 MTERF2Q49AM1 385 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CARM1Q86X55 608 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 RIMS3Q9UJD0 308 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 STAP1Q9ULZ2 295 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ALDH3A2P51648 485 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 P2RX3P56373 397 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 LIPEQ05469 1076 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 GALNT3Q14435 633 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 TIGD6Q17RP2 521 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 MBLAC2Q68D91 279 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ZUFSPQ96AP4 578 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ZNF512Q96ME7 567 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 OR52B2Q96RD2 323 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 BEX2Q9BXY8 128 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 NIF3L1Q9GZT8 377 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 MORF4L1Q9UBU8 362 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 UBXN8O00124 270 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 LRIG2O94898 1065 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 IDH2P48735 452 aaKnown RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ARL13AQ5H913 290 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CHMP1BQ7LBR1 199 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 HYLS1Q96M11 299 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 RANBP3Q9H6Z4 567 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 NTN4Q9HB63 628 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CLN6Q9NWW5 311 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 FAM8A1Q9UBU6 413 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 SFMBT1Q9UHJ3 866 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CDH7Q9ULB5 785 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 INVSQ9Y283 1065 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ACOX3O15254 700 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 DFNA5O60443 496 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ERN1O75460 977 aaKnown RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 INMTO95050 263 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 AMHP03971 560 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 MAPTP10636 758 aaKnown RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 POU1F1P28069 291 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 SMCO1Q147U7 214 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 VPS72Q15906 364 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ZYG11AQ6WRX3 759 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 TEX47Q8TBZ9 253 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 CNDP2Q96KP4 475 aaKnown RBP12.88□□□□□ -0.35
VAMP4-201ENST00000236192 KATNAL1Q9BW62 490 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 ENPP5Q9UJA9 477 aa12.88□□□□□ -0.35
VAMP4-201ENST00000236192 KLHL18O94889 574 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 MT-ND1P03886 318 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 ACOT2P49753 483 aa12.87□□□□□ -0.35
VAMP4-201ENST00000236192 PIGGQ5H8A4 983 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms