RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 HOXC13P31276 330 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 CYP2C18P33260 490 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 TIAL1Q01085 375 aaKnown RBP eCLIP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 MAPRE1Q15691 268 aaKnown RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 C16orf59Q7L2K0 433 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 TAS1R1Q7RTX1 841 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 LGI2Q8N0V4 545 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 EFHBQ8N7U6 833 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 SLC39A13Q96H72 371 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 UBXN10Q96LJ8 280 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 FAM193BQ96PV7 902 aaPredicted RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 ACOX2Q99424 681 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 CCDC28BQ9BUN5 200 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 VPS45Q9NRW7 570 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 GKN1Q9NS71 199 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 AURKCQ9UQB9 309 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 TLR6Q9Y2C9 796 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 PCDHGC4Q9Y5F7 938 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 SPO11Q9Y5K1 396 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 DNAJC15Q9Y5T4 150 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 SLCO1B7G3V0H7 640 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 AP3B1O00203 1094 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 PLOD2O00469 737 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 PIP5K1BO14986 540 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 OR1I1O60431 355 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 BCAS2O75934 225 aaPredicted RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 CDK14O94921 469 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 GRIA3P42263 894 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 LRP8Q14114 963 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF235Q14590 738 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 FUT11Q495W5 492 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF678Q5SXM1 525 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 RARS2Q5T160 578 aaKnown RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 AFMIDQ63HM1 303 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 NADSYN1Q6IA69 706 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 PAQR3Q6TCH7 311 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 LINGO4Q6UY18 593 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 RNF19BQ6ZMZ0 732 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 TMEM173Q86WV6 379 aaPredicted RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 PELI3Q8N2H9 469 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 LINC01599Q8WXQ3 324 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 VPS33AQ96AX1 596 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 ZNF512Q96ME7 567 aaPredicted RBP9.15□□□□□ -0.94
SYDE2-201ENST00000234668 SLC30A3Q99726 388 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 VCX3BQ9H321 246 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 ZDHHC7Q9NXF8 308 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 Q9Y3F1 56 aa9.15□□□□□ -0.94
SYDE2-201ENST00000234668 SAC3D1A6NKF1 404 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 PDLIM1O00151 329 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 CDC7O00311 574 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 CASQ2O14958 399 aaPredicted RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 AHCYL1O43865 530 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 ADAMTS4O75173 837 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 GLP2RO95838 553 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 SNRPB2P08579 225 aaKnown RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 IRF1P10914 325 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 RHOQP17081 205 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 PSMC3P17980 439 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 DIO3P55073 304 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 IRX1P78414 480 aaPredicted RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 MYBPC1Q00872 1141 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 AAK1Q2M2I8 961 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 MFSD14CQ5VZR4 134 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 PRSS55Q6UWB4 352 aaPredicted RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 ZNF598Q86UK7 904 aaKnown RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 HERC6Q8IVU3 1022 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 ZNF683Q8IZ20 524 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 UMODL1-AS1Q8N2C9 162 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 GALNT15Q8N3T1 639 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 OR4K2Q8NGD2 314 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 TUBGCP3Q96CW5 907 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 MAELQ96JY0 434 aaKnown RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 CDK15Q96Q40 435 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 PRKD2Q9BZL6 878 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 ZFYVE28Q9HCC9 887 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 PRDM5Q9NQX1 630 aaPredicted RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 DDX18Q9NVP1 670 aaKnown RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 POLR3BQ9NW08 1133 aaPredicted RBP9.15□□□□□ -0.95
SYDE2-201ENST00000234668 USP22Q9UPT9 525 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 AP4S1Q9Y587 144 aa9.15□□□□□ -0.95
SYDE2-201ENST00000234668 SUPT3HB4E1H0 165 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 TRIM38O00635 465 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 NRP2O60462 931 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 SUPT3HO75486 399 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 RBP1P09455 135 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 IMPDH1P20839 514 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 CLCN5P51795 746 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 ZNF135P52742 658 aaPredicted RBP9.14□□□□□ -0.95
SYDE2-201ENST00000234668 TRIM25Q14258 630 aaKnown RBP9.14□□□□□ -0.95
SYDE2-201ENST00000234668 ACAP2Q15057 778 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 TSNQ15631 228 aaKnown RBP9.14□□□□□ -0.95
SYDE2-201ENST00000234668 CWF19L1Q69YN2 538 aaKnown RBP9.14□□□□□ -0.95
SYDE2-201ENST00000234668 RBM44Q6ZP01 1051 aaKnown RBP9.14□□□□□ -0.95
SYDE2-201ENST00000234668 SPPL2CQ8IUH8 684 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 METTL25Q8N6Q8 603 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 TMEM102Q8N9M5 508 aaPredicted RBP9.14□□□□□ -0.95
SYDE2-201ENST00000234668 DNAJB14Q8TBM8 379 aa9.14□□□□□ -0.95
SYDE2-201ENST00000234668 CANT1Q8WVQ1 401 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms