RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 WNT9AO14904 365 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 RAD51BO15315 384 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 BUD23O43709 281 aaKnown RBP15.01□□□□□ -0.01
RPA3-201ENST00000223129 RECQL5O94762 991 aaPredicted RBP15.01□□□□□ -0.01
RPA3-201ENST00000223129 TMEM63AO94886 807 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 TPSB2P20231 275 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 ETV3P41162 512 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 SLC7A5Q01650 507 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 TPSAB1Q15661 275 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 SPDYCQ5MJ68 293 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 LYSMD4Q5XG99 296 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 NAT8LQ8N9F0 302 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 LRRN4CLQ8ND94 238 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 L2HGDHQ9H9P8 463 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 CASS4Q9NQ75 786 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 TMEM74BQ9NUR3 256 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 CD84Q9UIB8 345 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 CA5BQ9Y2D0 317 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 SNX24Q9Y343 169 aa15.01□□□□□ -0.01
RPA3-201ENST00000223129 MAGEA6P43360 314 aa15□□□□□ -0.01
RPA3-201ENST00000223129 CDH17Q12864 832 aa15□□□□□ -0.01
RPA3-201ENST00000223129 SETMARQ53H47 684 aaPredicted RBP15□□□□□ -0.01
RPA3-201ENST00000223129 CERCAMQ5T4B2 595 aa15□□□□□ -0.01
RPA3-201ENST00000223129 RNASEH2BQ5TBB1 312 aaKnown RBP15□□□□□ -0.01
RPA3-201ENST00000223129 IZUMO3Q5VZ72 239 aa15□□□□□ -0.01
RPA3-201ENST00000223129 KDM7AQ6ZMT4 941 aa15□□□□□ -0.01
RPA3-201ENST00000223129 Q6ZVL8 140 aa15□□□□□ -0.01
RPA3-201ENST00000223129 ZNF534Q76KX8 674 aa15□□□□□ -0.01
RPA3-201ENST00000223129 GLT6D1Q7Z4J2 308 aa15□□□□□ -0.01
RPA3-201ENST00000223129 MMGT1Q8N4V1 131 aa15□□□□□ -0.01
RPA3-201ENST00000223129 SUMF1Q8NBK3 374 aa15□□□□□ -0.01
RPA3-201ENST00000223129 DNASE2BQ8WZ79 361 aa15□□□□□ -0.01
RPA3-201ENST00000223129 COQ10AQ96MF6 247 aa15□□□□□ -0.01
RPA3-201ENST00000223129 ERP44Q9BS26 406 aa15□□□□□ -0.01
RPA3-201ENST00000223129 DPH5Q9H2P9 285 aa15□□□□□ -0.01
RPA3-201ENST00000223129 BPIFA1Q9NP55 256 aa15□□□□□ -0.01
RPA3-201ENST00000223129 SMG5Q9UPR3 1016 aaKnown RBP15□□□□□ -0.01
RPA3-201ENST00000223129 ARL5AQ9Y689 179 aa15□□□□□ -0.01
RPA3-201ENST00000223129 PLXNA2O75051 1894 aa15□□□□□ -0.01
RPA3-201ENST00000223129 MYLKQ15746 1914 aa15□□□□□ -0.01
RPA3-201ENST00000223129 TNRC6BQ9UPQ9 1833 aaKnown RBP15□□□□□ -0.01
RPA3-201ENST00000223129 AVILO75366 819 aa15□□□□□ -0.01
RPA3-201ENST00000223129 ZNF30P17039 623 aa15□□□□□ -0.01
RPA3-201ENST00000223129 CD27P26842 260 aa15□□□□□ -0.01
RPA3-201ENST00000223129 NBL1P41271 181 aa15□□□□□ -0.01
RPA3-201ENST00000223129 RPL21P46778 160 aaKnown RBP15□□□□□ -0.01
RPA3-201ENST00000223129 STC1P52823 247 aa15□□□□□ -0.01
RPA3-201ENST00000223129 CREB5Q02930 508 aa15□□□□□ -0.01
RPA3-201ENST00000223129 PTPRCAPQ14761 206 aa15□□□□□ -0.01
RPA3-201ENST00000223129 POU6F1Q14863 301 aa15□□□□□ -0.01
RPA3-201ENST00000223129 WDR45BQ5MNZ6 344 aa15□□□□□ -0.01
RPA3-201ENST00000223129 C8orf74Q6P047 294 aa15□□□□□ -0.01
RPA3-201ENST00000223129 TMC3Q7Z5M5 1100 aa15□□□□□ -0.01
RPA3-201ENST00000223129 PPIL6Q8IXY8 311 aa15□□□□□ -0.01
RPA3-201ENST00000223129 PIGKQ92643 395 aa15□□□□□ -0.01
RPA3-201ENST00000223129 SERAC1Q96JX3 654 aa15□□□□□ -0.01
RPA3-201ENST00000223129 KLF6Q99612 283 aaPredicted RBP15□□□□□ -0.01
RPA3-201ENST00000223129 MBNL1Q9NR56 388 aaKnown RBP15□□□□□ -0.01
RPA3-201ENST00000223129 RAB23Q9ULC3 237 aa15□□□□□ -0.01
RPA3-201ENST00000223129 KCTD3Q9Y597 815 aa15□□□□□ -0.01
RPA3-201ENST00000223129 CLDN2P57739 230 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 SESN2P58004 480 aaPredicted RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 CDK16Q00536 496 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 TRADDQ15628 312 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 TECPR1Q7Z6L1 1165 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 TTC30BQ8N4P2 665 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 BRSK1Q8TDC3 778 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 SNF8Q96H20 258 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 SLC6A18Q96N87 628 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 PHOX2BQ99453 314 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 PSMD11O00231 422 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 HNRNPA2B1P22626 353 aaKnown RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 ITGA8P53708 1063 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 WSCD2Q2TBF2 565 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 CCDC38Q502W7 563 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 DUPD1Q68J44 220 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 LRRC8BQ6P9F7 803 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 PCGF5Q86SE9 256 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 CAND1Q86VP6 1230 aaKnown RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 PELI3Q8N2H9 469 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 ZCCHC9Q8N567 271 aaKnown RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 TP53I13Q8NBR0 393 aaPredicted RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 C1orf216Q8TAB5 229 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 SCAMP4Q969E2 229 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 CENPTQ96BT3 561 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 SRPK1Q96SB4 655 aaKnown RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 TRABDQ9H4I3 376 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.99□□□□□ -0.01
RPA3-201ENST00000223129 HACD3Q9P035 362 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 PILRBQ9UKJ0 227 aa14.99□□□□□ -0.01
RPA3-201ENST00000223129 UTP11Q9Y3A2 253 aaKnown RBP14.99□□□□□ -0.01
RPA3-201ENST00000223129 DNAH14Q0VDD8 3507 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 CCDC78A2IDD5 438 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 H0Y8X5 98 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 TP73O15350 636 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 SEC31AO94979 1220 aaKnown RBP14.98□□□□□ -0.01
RPA3-201ENST00000223129 HMGCLP35914 325 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 SPINT3P49223 89 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 CRADDP78560 199 aa14.98□□□□□ -0.01
RPA3-201ENST00000223129 SARNPP82979 210 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms