RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 HNRNPLP14866 589 aaKnown RBP eCLIP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 ZNF37AP17032 561 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 LAG3P18627 525 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CR2P20023 1033 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 RGRP47804 291 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 SGSHP51688 502 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 NFKB2Q00653 900 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 TLE2Q04725 743 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 GALNT1Q10472 559 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 TWF1Q12792 350 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CYLC2Q14093 348 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 HERC3Q15034 1050 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 TLDC1Q6P9B6 456 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CUZD1Q86UP6 607 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 ITIH5Q86UX2 942 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 RYBPQ8N488 228 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CPSF7Q8N684 471 aaKnown RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 KDM1BQ8NB78 822 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 HJURPQ8NCD3 748 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CEP70Q8NHQ1 597 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 ANKRD49Q8WVL7 239 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 DNAJC9Q8WXX5 260 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CCDC124Q96CT7 223 aaKnown RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 CDKN2AIPNLQ96HQ2 116 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 LENG8Q96PV6 779 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 AARSD1Q9BTE6 412 aaKnown RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 SYTL2Q9HCH5 934 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 SMPD4Q9NXE4 827 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 G3BP2Q9UN86 482 aaKnown RBP8.27□□□□□ -1.09
VAMP3-201ENST00000054666 TBC1D30Q9Y2I9 924 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 RAI2Q9Y5P3 530 aa8.27□□□□□ -1.09
VAMP3-201ENST00000054666 C2orf78A6NCI8 922 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TMEM233B4DJY2 109 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 MAP3K7O43318 606 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TBL1XO60907 577 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TBX10O75333 385 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 PDE5AO76074 875 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SRP72O76094 671 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TMCC1O94876 653 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 WISP3O95389 354 aaPredicted RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 PYGLP06737 847 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CCL5P13501 91 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 ACADSP16219 412 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 RFC2P35250 354 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 GCKP35557 465 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SUOXP51687 545 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SMAD3P84022 425 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SULT2A1Q06520 285 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CDH18Q13634 790 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 PTPRCAPQ14761 206 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 MAPRE2Q15555 327 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CMPK2Q5EBM0 449 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 RALGPS1Q5JS13 557 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 AARS2Q5JTZ9 985 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TRIM68Q6AZZ1 485 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 AAGABQ6PD74 315 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 MYLK4Q86YV6 388 aaPredicted RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CARNMT1Q8N4J0 409 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 EFHBQ8N7U6 833 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 OR4K2Q8NGD2 314 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 MAELQ96JY0 434 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TOX2Q96NM4 488 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 ASB2Q96Q27 587 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TCF12Q99081 682 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 LBHD1Q9BQE6 289 aaPredicted RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 OSBPL1AQ9BXW6 950 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 NMRK1Q9NWW6 199 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 TAS2R13Q9NYV9 303 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 VPS28Q9UK41 221 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 LSM7Q9UK45 103 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 PRPF19Q9UMS4 504 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 ANKRD36A6QL64 1941 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SDHDO14521 159 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 AIM2O14862 343 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 STX7O15400 261 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SUPT7LO94864 414 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CD1DP15813 335 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 IMPDH1P20839 514 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 ATP6V1C1P21283 382 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 LPOP22079 712 aaPredicted RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 KCNA5P22460 613 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SP100P23497 879 aaPredicted RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CA8P35219 290 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 RHOAP61586 193 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 HERVK_113P63132 956 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 BTKQ06187 659 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 RAD51Q06609 339 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 PEX6Q13608 980 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 RAB33AQ14088 237 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 SEMA3AQ14563 771 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CYTH1Q15438 398 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 GEN1Q17RS7 908 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 PABPC1LQ4VXU2 614 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 CXorf57Q6NSI4 855 aaKnown RBP8.26□□□□□ -1.09
VAMP3-201ENST00000054666 FAM117BQ6P1L5 589 aa8.26□□□□□ -1.09
VAMP3-201ENST00000054666 ISCA2Q86U28 154 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms