RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RGS18Q9NS28 235 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 VPS9D1Q9Y2B5 631 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TEX28O15482 410 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TSPAN3O60637 253 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TPSB2P20231 275 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 PIK3R1P27986 724 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SRP54P61011 504 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SP2Q02086 613 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 LGALS3BPQ08380 585 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 PWP1Q13610 501 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TCEAL1Q15170 157 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TPSAB1Q15661 275 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC10A6Q3KNW5 377 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 PPP2R2DQ66LE6 453 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SPATA6LQ8N4H0 392 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 ATG16L2Q8NAA4 619 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC39A3Q9BRY0 314 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 HDHD2Q9H0R4 259 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TMEM161AQ9NX61 479 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 RAP2CQ9Y3L5 183 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 NRCAMQ92823 1304 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TIPRLO75663 272 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 HOXC6P09630 235 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 NFE2Q16621 373 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 CERCAMQ5T4B2 595 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC41A1Q8IVJ1 513 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 STX19Q8N4C7 294 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 NIPA2Q8N8Q9 360 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SMAD5Q99717 465 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC25A23Q9BV35 468 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 GOLGA2P5Q9HBQ8 144 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 MID1IP1Q9NPA3 183 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 FETUBQ9UGM5 382 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 KLHL3Q9UH77 587 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 SFMBT1Q9UHJ3 866 aa12.16□□□□□ -0.46
TSPAN9-201ENST00000011898 FAM155AB1AL88 458 aaPredicted RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 E7ENX8 843 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 I3L521 148 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 MDM4O15151 490 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 RAMP2O60895 175 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ENDOD1O94919 500 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 SERPINF2P08697 491 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 IRF1P10914 325 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 MLNP12872 115 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PRKACAP17612 351 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ALDH4A1P30038 563 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ADRA1BP35368 520 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ASPAP45381 313 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 GNG2P59768 71 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 BNC1Q01954 994 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 GRB14Q14449 540 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 TMEM192Q8IY95 271 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 SNX31Q8N9S9 440 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 CENPOQ9BU64 300 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF556Q9HAH1 456 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 FAIMQ9NVQ4 179 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PCDHGB4Q9UN71 923 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 MYOCOSA0A1B0GUC4 107 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ILVBLA1L0T0 632 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 F5H5T6 163 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PIGRP01833 764 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF135P52742 658 aaPredicted RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ECT2LQ008S8 904 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PEX6Q13608 980 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 DNASE1L3Q13609 305 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ANGPT1Q15389 498 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 SFT2D3Q587I9 215 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 VWA5B1Q5TIE3 1220 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ERICH5Q6P6B1 374 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PIWIL4Q7Z3Z4 852 aaKnown RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 TCF12Q99081 682 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 NDUFAF1Q9Y375 327 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 GPX6P59796 221 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PSME3P61289 254 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 TAB1Q15750 504 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ZNF284Q2VY69 593 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 MSS51Q4VC12 460 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 C17orf99Q6UX52 265 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 SLC26A9Q7LBE3 791 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 OFCC1Q8IZS5 231 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ENDOVQ8N8Q3 282 aaKnown RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 HMGXB4Q9UGU5 601 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 POMPQ9Y244 141 aa12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 PTPRZ1P23471 2315 aaPredicted RBP12.15□□□□□ -0.46
TSPAN9-201ENST00000011898 ATP6AP2A0A1C7CYW4 349 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 MFSD11O43934 449 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 SNAP91O60641 907 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 PQBP1O60828 265 aaKnown RBP12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 ATP6AP2O75787 350 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms