RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Camk1dQ8BW96 385 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Clec1aQ8BWY2 269 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mab21L3Q8CI17 429 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ago3Q8CJF9 860 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gsg1Q8R1W2 324 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tspan33Q8R3S2 283 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr589Q8VGV8 317 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pqbp1Q91VJ5 263 aaKnown RBP9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mrps2Q924T2 291 aaKnown RBP9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gemin2Q9CQQ4 269 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Batf3Q9D275 118 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cnbd2Q9D5U8 673 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Coro1cQ9WUM4 474 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ssxb6A2BI74 170 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Apol11bE9PUZ0 337 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm8369E9PZI3 166 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Azin1O35484 448 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Lsm3P62311 102 aaKnown RBP9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 LcorlQ3U285 600 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pla2g4dQ50L43 825 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Lrrc8bQ5DU41 803 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mapk10Q61831 464 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Krt72Q6IME9 520 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 SvoplQ6PDF3 494 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fads6Q80UG1 342 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 FicdQ8BIX9 458 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 4930524N10RikQ9D519 233 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Prorsd1Q9D820 169 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Akr1e2Q9DCT1 301 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ptk2bQ9QVP9 1009 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Bcorl1A2AQH4 1781 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rhox3cA2AWM0 215 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rhox3hL7MU37 215 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Hcn3O88705 779 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fitm2P59266 262 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pou2f2Q00196 463 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slfn4Q3UV66 602 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rhox3aQ4TU90 215 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 WhammQ571B6 793 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 StyxQ60969 223 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rundc3bQ6PDC0 408 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr1037Q7TR84 321 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Disc1Q811T9 852 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tmem169Q8BG50 297 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Atp6v1g3Q8BMC1 118 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Kank2Q8BX02 843 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Plac9Q8K262 108 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fbxo21Q8VDH1 627 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gramd1aQ8VEF1 722 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 DarsQ922B2 501 aaKnown RBP9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 MmadhcQ99LS1 296 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Efcab9Q9DAM2 216 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Plscr2Q9DCW2 307 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tlr6Q9EPW9 795 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Asap1Q9QWY8 1147 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pkp3Q9QY23 797 aa9.74□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Col4a3Q9QZS0 1669 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Golga4Q91VW5 2238 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Znf711A2ANX9 761 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Skint1A7TZE6 364 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Vmn2r24D3YUI0 854 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm8237E9Q257 205 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Nkx1-1G3UXB3 402 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Vmn2r57L7N269 863 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cxcl9P18340 126 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 PlaaP27612 794 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pim3P58750 326 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Sh2d1b2Q45HK4 132 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Trit1Q80UN9 467 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Trim62Q80V85 475 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Znf784Q8BI69 297 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 HnrnplQ8R081 586 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 HnrnprQ8VHM5 632 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Paip2bQ91W45 136 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Q922M7 232 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mrpl45Q9D0Q7 306 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 TcimQ9D915 106 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tubb3Q9ERD7 450 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pik3cgQ9JHG7 1102 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Insl5Q9WUG6 135 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Clcn5Q9WVD4 746 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Spag17Q5S003 2320 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ep400Q8CHI8 3072 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ism1A2ATD1 454 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm5145F8VQ88 278 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 MttpO08601 894 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Scamp3O35609 349 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc2a3P32037 493 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Crhr1P35347 415 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cct8P42932 548 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cdh6P97326 790 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 AcadsQ07417 412 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cyb5r2Q3KNK3 276 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Zfp606Q7TSV0 794 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mppe1Q80XL7 396 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Hmgxb4Q80Y32 594 aaKnown RBP9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Arl5aQ80ZU0 179 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 SvopQ8BFT9 548 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rnf38Q8BI21 518 aa9.73□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Hspbap1Q8BK58 483 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms