RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Nr1d2Q60674 576 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 AftphQ80WT5 931 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Echs1Q8BH95 290 aaKnown RBP11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ppp6cQ9CQR6 305 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Nos1apQ9D3A8 503 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Il23aQ9EQ14 196 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 MkksQ9JI70 570 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Zbtb18Q9WUK6 522 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 A930018M24RikB7ZMY3 218 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm10720D3Z1I5 223 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm17535J3KMR8 224 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gm16427J3QN52 483 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Chrna1P04756 457 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Csf3rP40223 837 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Kir3dl1P83555 432 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tdpoz3Q717B4 365 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Vac14Q80WQ2 782 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mrpl58Q8R035 206 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Fbxo33Q8VE08 562 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ndufb5Q9CQH3 189 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ddit4Q9D3F7 229 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 TcimQ9D915 106 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Aff4Q9ESC8 1160 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mpp6Q9JLB0 553 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Scn3aA2ASI5 1947 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Pkd2l1A2A259 760 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Aldoart1A6ZI46 419 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 PtpraP18052 829 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 GemP55041 295 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 B3gat3P58158 335 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Nomo1Q6GQT9 1214 aaKnown RBP11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Fbxw21Q8BI38 468 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 KyQ8C8H8 661 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Pramel1Q99MW3 458 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ankrd61Q9CQM6 421 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Mrpl45Q9D0Q7 306 aaKnown RBP11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Rin2Q9D684 903 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Rai2Q9QVY8 529 aa11.34□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Ism2D3Z6A3 493 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Azin1O35484 448 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Cdh1P09803 884 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 BdnfP21237 249 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 TubP50586 505 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 OxtrP97926 388 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Cd300lgQ1ERP8 331 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 RasefQ5RI75 627 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 IspdQ5RJG7 447 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 StyxQ60969 223 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Polr2eQ80UW8 210 aaKnown RBP11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Kank2Q8BX02 843 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Smim14Q91VT8 99 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Tmem246Q91YV9 403 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Acbd6Q9D061 282 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Plscr2Q9DCW2 307 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Slc28a3Q9ERH8 703 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Cngb3Q9JJZ9 694 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Nt5cQ9JM14 200 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Gpc6Q9R087 555 aa11.33□□□□□ -0.59
Topbp1-201ENSMUST00000035164 Thsd7aQ69ZU6 1645 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Plch1Q4KWH5 1682 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Chil5A0A0G2JDS2 431 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr1049A2ARZ0 308 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 ZxdbA2CE44 873 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 S100zB9EJL3 99 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm10721J3QPJ9 223 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Angpt2O35608 496 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 MtpnP62774 118 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 NyxP83503 476 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Npy2rP97295 381 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Prom2Q3UUY6 835 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Adamts16Q69Z28 1222 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ccdc116Q80X53 541 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dnajb13Q80Y75 316 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 D3Ertd751eQ8BGN2 192 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Serpina3bQ8BYY9 420 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Castor2Q8CAB8 329 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cacnb2Q8CC27 655 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Usp45Q8K387 813 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcdhgc3Q91XX1 934 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcdhac2Q91Y09 1006 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PclafQ9CQX4 110 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm12248A0A1W2P8B8 313 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Esp31A8R0W3 114 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nfx1B1AY10 1114 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r24D3YUI0 854 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm3259D3YUK0 475 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pot1bH7BX60 640 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 LatO54957 242 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TnfP06804 235 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Adra1dP97714 562 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gpr174Q3U507 335 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cyp4f37Q3V1F1 546 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fam71bQ5STT6 665 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Msi1Q61474 362 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AtminQ6P9S1 818 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp606Q7TSV0 794 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Prox2Q8BII1 593 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 ArhgdiaQ99PT1 204 aaKnown RBP11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Spata9Q9D9R3 252 aa11.33□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Jam2Q9JI59 298 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms