RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CHST9Q7L1S5 443 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 CIR1Q86X95 450 aaPredicted RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 HPS6Q86YV9 775 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 MFN1Q8IWA4 741 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 DSELQ8IZU8 1212 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 RHEBL1Q8TAI7 183 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 PPP1R36Q96LQ0 422 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 ZNF512Q96ME7 567 aaPredicted RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 NR1H4Q96RI1 486 aaPredicted RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 TCF12Q99081 682 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 MRPL1Q9BYD6 325 aaKnown RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 UTP6Q9NYH9 597 aaKnown RBP12.15□□□□□ -0.46
CLN8-212ENST00000637083 SCOCQ9UIL1 159 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 MYLKQ15746 1914 aa12.15□□□□□ -0.46
CLN8-212ENST00000637083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 ILVBLA1L0T0 632 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 C2orf81A6NN90 581 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 SMNDC1O75940 238 aaKnown RBP eCLIP12.15□□□□□ -0.47
CLN8-212ENST00000637083 VNN2O95498 520 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 ABL2P42684 1182 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 ALDH7A1P49419 539 aaKnown RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 GATMP50440 423 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 SUOXP51687 545 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 ARSDP51689 593 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 KCNQ1P51787 676 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 INHBCP55103 352 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 PRMT2P55345 433 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 IRX1P78414 480 aaPredicted RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 SULT2A1Q06520 285 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 ZNF177Q13360 481 aaPredicted RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 CCNIQ14094 377 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 ZFP1Q6P2D0 407 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 RSPO2Q6UXX9 243 aaPredicted RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 FAM136AQ96C01 138 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 ECSITQ9BQ95 431 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 CYP4F12Q9HCS2 524 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 NLE1Q9NVX2 485 aaPredicted RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 MTRRQ9UBK8 725 aa12.15□□□□□ -0.47
CLN8-212ENST00000637083 G3BP2Q9UN86 482 aaKnown RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 ZFP37Q9Y6Q3 630 aaPredicted RBP12.15□□□□□ -0.47
CLN8-212ENST00000637083 VWA8A3KMH1 1905 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 UBDO15205 165 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 INSIG1O15503 277 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 ZMPSTE24O75844 475 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 RHOCP08134 193 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 PDHA1P08559 390 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 HNRNPLP14866 589 aaKnown RBP eCLIP12.14□□□□□ -0.47
CLN8-212ENST00000637083 ATF6P18850 670 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 PPP3CCP48454 512 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 RPL26P61254 145 aaKnown RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 TAF1AQ15573 450 aaPredicted RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 TAF12Q16514 161 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 TYSND1Q2T9J0 566 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 TCHHL1Q5QJ38 904 aaPredicted RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 ZNF678Q5SXM1 525 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 GPR158Q5T848 1215 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 IZUMO2Q6UXV1 221 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 CHSY3Q70JA7 882 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 ISCA2Q86U28 154 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 FAM126BQ8IXS8 530 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 DLG3Q92796 817 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 RCN3Q96D15 328 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 MOCOSQ96EN8 888 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 CDKN2AIPNLQ96HQ2 116 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 DNAJC1Q96KC8 554 aaKnown RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 SPON2Q9BUD6 331 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 UNKQ9C0B0 810 aaKnown RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 KLHL4Q9C0H6 718 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 TFB2MQ9H5Q4 396 aaKnown RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 ALG9Q9H6U8 611 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 C6orf203Q9P0P8 240 aaPredicted RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 MARCH4Q9P2E8 410 aaPredicted RBP12.14□□□□□ -0.47
CLN8-212ENST00000637083 PPM1HQ9ULR3 514 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 CRYL1Q9Y2S2 319 aa12.14□□□□□ -0.47
CLN8-212ENST00000637083 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 TTC24A2A3L6 582 aaPredicted RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 CCDC162PA2VCL2 907 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 NEMP2A6NFY4 417 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 A6NHS1 94 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 NT5C1B-RDH14C9J2C7 533 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 SUPT7LO94864 414 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 CD1DP15813 335 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 ME2P23368 584 aa12.13□□□□□ -0.47
CLN8-212ENST00000637083 HOXD9P28356 352 aaPredicted RBP12.13□□□□□ -0.47
CLN8-212ENST00000637083 ATP4BP51164 291 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms