RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FIG4Q92562 907 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 CD101Q93033 1021 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 ELP4Q96EB1 424 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 SAAL1Q96ER3 474 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 UHRF2Q96PU4 802 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 PRKRIP1Q9H875 184 aaPredicted RBP3.33□□□□□ -1.88
SRP54-214ENST00000630962 KCND2Q9NZV8 630 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 RCOR1Q9UKL0 485 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 TTC7AQ9ULT0 858 aaPredicted RBP3.33□□□□□ -1.88
SRP54-214ENST00000630962 HSF4Q9ULV5 492 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 A4GNTQ9UNA3 340 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 ERVK-11Q9UQG0 969 aa3.33□□□□□ -1.88
SRP54-214ENST00000630962 TEX13CA0A0J9YWL9 993 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 TMEM202A6NGA9 273 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 LRRC53A6NM62 1247 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 PRSS47A8MTI9 375 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 USP17L23D6RBM5 183 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 TULP2O00295 520 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 HOXC11O43248 304 aaPredicted RBP3.32□□□□□ -1.88
SRP54-214ENST00000630962 PLRG1O43660 514 aaKnown RBP3.32□□□□□ -1.88
SRP54-214ENST00000630962 IGLV2-11P01706 119 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 URODP06132 367 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 LINC00271P0C7V0 271 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 MAOAP21397 527 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 SSTR2P30874 369 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 PIGAP37287 484 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 METAP2P50579 478 aaKnown RBP eCLIP3.32□□□□□ -1.88
SRP54-214ENST00000630962 UFM1P61960 85 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 ILF3Q12906 894 aaKnown RBP eCLIP3.32□□□□□ -1.889e-7■■■■□ 20.5
SRP54-214ENST00000630962 RNPS1Q15287 305 aaKnown RBP3.32□□□□□ -1.88
SRP54-214ENST00000630962 GSTA3Q16772 222 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 TXNDC8Q6A555 127 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 KCTD18Q6PI47 426 aaPredicted RBP3.32□□□□□ -1.88
SRP54-214ENST00000630962 FOXL2NBQ6ZUU3 175 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 C9orf139Q6ZV77 190 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 TAOK1Q7L7X3 1001 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 CPOQ8IVL8 374 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 DCUN1D3Q8IWE4 304 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 SORCS1Q8WY21 1168 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 CDCA5Q96FF9 252 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 TMEM19Q96HH6 336 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 PKP4Q99569 1192 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 CNGB3Q9NQW8 809 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 C20orf141Q9NUB4 165 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 SLC9A2Q9UBY0 812 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 FBXO9Q9UK97 447 aaPredicted RBP3.32□□□□□ -1.88
SRP54-214ENST00000630962 STON1Q9Y6Q2 735 aa3.32□□□□□ -1.88
SRP54-214ENST00000630962 CGNL1Q0VF96 1302 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 FAM72CH0Y354 149 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 TNPO2O14787 897 aaKnown RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 BCAT2O15382 392 aaPredicted RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 NDUFS7O75251 213 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 KDM4BO94953 1096 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 CETPP11597 493 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 FASLGP48023 281 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 EIF3BP55884 814 aaKnown RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 DHX8Q14562 1220 aaKnown RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 FAM76BQ5HYJ3 339 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 ZNF667Q5HYK9 610 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 OTUD3Q5T2D3 398 aaPredicted RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 FAM72AQ5TYM5 149 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 IRAK1BP1Q5VVH5 260 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 PMS2CLQ68D20 193 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 FAM72DQ6L9T8 149 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 MTSS1LQ765P7 747 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 TRMT1LQ7Z2T5 733 aaKnown RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 FAM72BQ86X60 149 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 MUC20Q8N307 709 aaPredicted RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 MORC4Q8TE76 937 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 ERGIC1Q969X5 290 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 APOPT1Q96IL0 206 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 HARBI1Q96MB7 349 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 DUX3Q96PT4 197 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 PSMD1Q99460 953 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 FAM110AQ9BQ89 295 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 IFIH1Q9BYX4 1025 aaKnown RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 MKKSQ9NPJ1 570 aaPredicted RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 DONSONQ9NYP3 566 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 AMDHD2Q9Y303 409 aa3.31□□□□□ -1.88
SRP54-214ENST00000630962 LRRFIP2Q9Y608 721 aaKnown RBP3.31□□□□□ -1.88
SRP54-214ENST00000630962 A0A0G2JPF8 293 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 HNRNPCL3B7ZW38 293 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 PRAC2D3DTV9 90 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 NPIPB11E5RHQ5 1161 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 SOCS6O14544 535 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 SEC14L5O43304 696 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 FGF17O60258 216 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 HNRNPCL1O60812 293 aaKnown RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 TACC1O75410 805 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 DDNO94850 711 aaPredicted RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 ATP1A1P05023 1023 aaKnown RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 HNRNPCL4P0DMR1 293 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 ABCD1P33897 745 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 CPOXP36551 454 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 NLRP5P59047 1200 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 PITX1P78337 314 aaPredicted RBP3.3□□□□□ -1.88
SRP54-214ENST00000630962 PHEXP78562 749 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 SLC20A2Q08357 652 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 EFNB3Q15768 340 aa3.3□□□□□ -1.88
SRP54-214ENST00000630962 USP41Q3LFD5 358 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms