RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CRYL1Q9Y2S2 319 aa19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.77■□□□□ 0.75
PCDHB11-202ENST00000624887 DCXO43602 365 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 ZBTB14O43829 449 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 F11P03951 625 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 MBL2P11226 248 aaPredicted RBP19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 GNAZP19086 355 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 PRDX6P30041 224 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 CCNG1P51959 295 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 EPHB3P54753 998 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 DEFB103AP81534 67 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 ACSBG2Q5FVE4 666 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 TMEM207Q6UWW9 146 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 SCUBE1Q8IWY4 988 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 PHTF2Q8N3S3 785 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 WDR60Q8WVS4 1066 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 CDKN2AIPNLQ96HQ2 116 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 CNDP1Q96KN2 507 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 TDRD1Q9BXT4 1180 aaKnown RBP19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 CATSPERZQ9NTU4 200 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 NLE1Q9NVX2 485 aaPredicted RBP19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 SMPD4Q9NXE4 827 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 C15orf41Q9Y2V0 281 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 INSL5Q9Y5Q6 135 aa19.76■□□□□ 0.75
PCDHB11-202ENST00000624887 NEMP2A6NFY4 417 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 C1RP00736 705 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 PRLP01236 227 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 FDXRP22570 491 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 ZNF140P52738 457 aaPredicted RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 SMAD3P84022 425 aaKnown RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 ARF5P84085 180 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 SEMA3AQ14563 771 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 NAA25Q14CX7 972 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 ZNF549Q6P9A3 640 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 CMTR2Q8IYT2 770 aaKnown RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 POU5F2Q8N7G0 328 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 CFAP61Q8NHU2 1237 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 RMDN1Q96DB5 314 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 FAM161BQ96MY7 647 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 THTPAQ9BU02 230 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 SPO11Q9Y5K1 396 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 IPO13O94829 963 aaKnown RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 CD160O95971 181 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 PSMA3P25788 255 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 TAF1AQ15573 450 aaPredicted RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 TYSND1Q2T9J0 566 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 SDCCAG8Q86SQ7 713 aaPredicted RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 SPNS2Q8IVW8 549 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 ULK2Q8IYT8 1036 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 KDM1BQ8NB78 822 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 AUTS2Q8WXX7 1259 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 WDR55Q9H6Y2 383 aaPredicted RBP19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 MAFFQ9ULX9 164 aa19.75■□□□□ 0.75
PCDHB11-202ENST00000624887 CARNS1A5YM72 827 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 A8MT66 165 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 KCNA5P22460 613 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 SUOXP51687 545 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 STC1P52823 247 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 KLF10Q13118 480 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 LSM12Q3MHD2 195 aaKnown RBP19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 GPR158Q5T848 1215 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 ACAD11Q709F0 780 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 PIM3Q86V86 326 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 SLC22A12Q96S37 553 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 CYP2S1Q96SQ9 504 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 NUF2Q9BZD4 464 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 SHCBP1LQ9BZQ2 653 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 ZNF334Q9HCZ1 680 aaPredicted RBP19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 GOLGA8QA0A0J9YX86 632 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 GOLGA8OA6NCC3 632 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 MEI4A8MW99 385 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 GOLGA8NF8WBI6 632 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 GREM1O60565 184 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 TBL1XO60907 577 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 ZMPSTE24O75844 475 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 EPHA3P29320 983 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 TIAL1Q01085 375 aaKnown RBP eCLIP19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 GLT6D1Q7Z4J2 308 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 NET1Q7Z628 596 aaPredicted RBP19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 NECAB2Q7Z6G3 386 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 SLC22A9Q8IVM8 553 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 MDGA1Q8NFP4 955 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 CCDC28BQ9BUN5 200 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 POPDC3Q9HBV1 291 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 TRPC7Q9HCX4 862 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 MRPL17Q9NRX2 175 aaKnown RBP19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 INTS10Q9NVR2 710 aaKnown RBP19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 CDYLQ9Y232 598 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 RAI2Q9Y5P3 530 aa19.74■□□□□ 0.75
PCDHB11-202ENST00000624887 F8W8V4 182 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 H0Y3Z8 333 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 H0Y626 953 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 TMCC1O94876 653 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 OLFM2O95897 454 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 PDHA1P08559 390 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 PMLP29590 882 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 SLC25A3Q00325 362 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 PABPC1LQ4VXU2 614 aaKnown RBP19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 AFTPHQ6ULP2 937 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 ISCA2Q86U28 154 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms