RNA–Protein interactions for RNA: ENST00000624145.3

ANKRD28-215, Transcript of ankyrin repeat domain 28, human

TSL 2 BASIC

Gene ANKRD28, Length 6,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-215	ENST00000624145	SSR2	P43308	183 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CLCN5	P51795	746 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	E2F2	Q14209	437 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PCID2	Q5JVF3	399 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZNF697	Q5TEC3	545 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ANKRD26P1	Q6NSI1	321 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	GPRIN3	Q6ZVF9	776 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZNF720	Q7Z2F6	126 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	NUP54	Q7Z3B4	507 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	NET1	Q7Z628	596 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	GJD3	Q8N144	294 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CADM2	Q8N3J6	435 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	SUN3	Q8TAQ9	357 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ETNPPL	Q8TBG4	499 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ACTL9	Q8TC94	416 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	NAT14	Q8WUY8	206 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	HNRNPLL	Q8WVV9	542 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	HPS1	Q92902	700 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	COQ8B	Q96D53	544 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	SIPA1	Q96FS4	1042 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CRAMP1	Q96RY5	1269 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	IL22	Q9GZX6	179 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PNPLA3	Q9NST1	481 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	MED11	Q9P086	117 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	GULP1	Q9UBP9	304 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	HMGXB3	Q12766	1538 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	TPP1	O14773	563 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	RIPK2	O43353	540 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	AKAP8	O43823	692 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PEX11A	O75192	247 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	KRT36	O76013	467 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	AP2A2	O94973	939 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CAMTA2	O94983	1202 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	KAT7	O95251	611 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PLG	P00747	810 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	IL1R1	P14778	569 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	IL12B	P29460	328 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ATP5C1	P36542	298 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CTSK	P43235	329 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	OR3A3	P47888	321 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	OR3A2	P47893	321 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	MYL6	P60660	151 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	S100A12	P80511	92 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CYP4F8	P98187	520 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PPP3CA	Q08209	521 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZNF268	Q14587	947 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	METTL21C	Q5VZV1	264 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ADAMTSL2	Q86TH1	951 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	TMEM17	Q86X19	198 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	SLC41A1	Q8IVJ1	513 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	SPAG16	Q8N0X2	631 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	BEND7	Q8N7W2	519 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	TC2N	Q8N9U0	490 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	NOA1	Q8NC60	698 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	OR8H1	Q8NGG4	311 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	OR52K2	Q8NGK3	314 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	MCFD2	Q8NI22	146 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	STK32A	Q8WU08	396 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PYDC1	Q8WXC3	89 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ING5	Q8WYH8	240 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	OR8D1	Q8WZ84	308 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	NSUN4	Q96CB9	384 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ERMAP	Q96PL5	475 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZNF350	Q9GZX5	532 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PRKAB1	Q9Y478	270 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	KCNE2	Q9Y6J6	123 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145		A0A0G2JLW4	131 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZSCAN5B	A6NJL1	495 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	MID1	O15344	667 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	TP73	O15350	636 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PER1	O15534	1290 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CCNK	O75909	580 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	MICAL2	O94851	1124 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	APOL3	O95236	402 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	PAPSS2	O95340	614 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CXCL8	P10145	99 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZNF20	P17024	532 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	AMPD1	P23109	780 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	EIF4B	P23588	611 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	HSD17B2	P37059	387 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	RBM34	P42696	430 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	NDST1	P52848	882 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CAPZA1	P52907	286 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	IKBKE	Q14164	716 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	GFOD2	Q3B7J2	385 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	COLEC12	Q5KU26	742 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CDKL4	Q5MAI5	379 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	C9orf64	Q5T6V5	341 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ADNP2	Q6IQ32	1131 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	CES3	Q6UWW8	571 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	ZCCHC23	Q6ZST2	131 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	UBE2R2	Q712K3	238 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	HDDC3	Q8N4P3	179 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	FAM13C	Q8NE31	585 aa		4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	SNIP1	Q8TAD8	396 aa	Known RBP	4.05	□□□□□ -1.76
ANKRD28-215	ENST00000624145	DNAJB14	Q8TBM8	379 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms