RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 RPP40O75818 363 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 GOT2P00505 430 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 SERPINF2P08697 491 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 HSPA1AP0DMV8 641 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 HSPA1BP0DMV9 641 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 ENO3P13929 434 aaPredicted RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 SELPP16109 830 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 HOXB8P17481 243 aaPredicted RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 FDXRP22570 491 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 PAX7P23759 505 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC11A1P49279 550 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 GATMP50440 423 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 PLK1P53350 603 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 ELAVL2Q12926 359 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 DUSP4Q13115 394 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 GALNT3Q14435 633 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 C5orf22Q49AR2 442 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 RTP2Q5QGT7 225 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 MRNIPQ6NTE8 343 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 CHSY3Q70JA7 882 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 ISCA2Q86U28 154 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 SPNS2Q8IVW8 549 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 BBS5Q8N3I7 341 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 GIPC2Q8TF65 315 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 GDPD5Q8WTR4 605 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 L3HYPDHQ96EM0 354 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 DNAJC1Q96KC8 554 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 CDK5RAP1Q96SZ6 601 aaKnown RBP8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 GSTO2Q9H4Y5 243 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 ALG9Q9H6U8 611 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 WDR41Q9HAD4 459 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 SUFUQ9UMX1 484 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 ARL5AQ9Y689 179 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 CHD9Q3L8U1 2897 aa8.34□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCDC162PA2VCL2 907 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 TCAF2A6NFQ2 919 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 CASQ2O14958 399 aaPredicted RBP8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 CFLARO15519 480 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 SMIM24O75264 130 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 SLC4A1P02730 911 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 KCNQ1P51787 676 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 THOP1P52888 689 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 INHBCP55103 352 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 SQLEQ14534 574 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 LPCAT4Q643R3 524 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 ALG1LQ6GMV1 187 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 PIM3Q86V86 326 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 CFAP52Q8N1V2 620 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 MRPL1Q9BYD6 325 aaKnown RBP8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 PPP1R12CQ9BZL4 782 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 MAGEH1Q9H213 219 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 RETREG1Q9H6L5 497 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 GPBP1L1Q9HC44 474 aaPredicted RBP8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 DNMT3LQ9UJW3 386 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 PACSIN3Q9UKS6 424 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 LRFN2Q9ULH4 789 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 RIMKLBQ9ULI2 386 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRAF6Q9Y4K3 522 aa8.34□□□□□ -1.08
SND1-IT1-201ENST00000623342 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 GREB1Q4ZG55 1949 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 A0A0D9SEW6 157 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ARVCFO00192 962 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 UBDO15205 165 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 PEX1O43933 1283 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ACSL4O60488 711 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 NBNO60934 754 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRPA1O75762 1119 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 NDST3O95803 873 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 OGNP20774 298 aaKnown RBP8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ME2P23368 584 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 PEX2P28328 305 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 HOXD9P28356 352 aaPredicted RBP8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 HOXD10P28358 340 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 SLC6A4P31645 630 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ATP5C1P36542 298 aaKnown RBP8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 KCNC1P48547 511 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 C1QTNF8P60827 252 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 NFKB2Q00653 900 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 GNA12Q03113 381 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 FLOT2Q14254 428 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 PTPRCAPQ14761 206 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 MAPRE2Q15555 327 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRIP10Q15642 601 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 LRRC36Q1X8D7 754 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF678Q5SXM1 525 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ZNF549Q6P9A3 640 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 ANKS3Q6ZW76 656 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 RPS27LQ71UM5 84 aaKnown RBP8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR13C4Q8NGS5 318 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 OR4L1Q8NH43 312 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 HHIPL1Q96JK4 782 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 NPAS2Q99743 824 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 MGME1Q9BQP7 344 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 TTLL2Q9BWV7 592 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 POPDC3Q9HBV1 291 aa8.33□□□□□ -1.08
SND1-IT1-201ENST00000623342 TRPC7Q9HCX4 862 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms