RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 KLF15Q9UIH9 416 aa13.11□□□□□ -0.31
ATRX-208ENST00000622960 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
ATRX-208ENST00000622960 LRRD1A4D1F6 860 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 AKR1B15C9JRZ8 316 aaPredicted RBP13.1□□□□□ -0.31
ATRX-208ENST00000622960 PSMD11O00231 422 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 HTRA2O43464 458 aaPredicted RBP13.1□□□□□ -0.31
ATRX-208ENST00000622960 CD48P09326 243 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 GIMD1P0DJR0 217 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 CCNCP24863 283 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 ABCG1P45844 678 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 PEX6Q13608 980 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 RTP5Q14D33 572 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 ALG11Q2TAA5 492 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 NCBP2-AS2Q69YL0 99 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 GUSBP11Q6P575 273 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 LSMEM2Q8N112 164 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 TSACCQ96A04 125 aaPredicted RBP13.1□□□□□ -0.31
ATRX-208ENST00000622960 GRAMD1AQ96CP6 724 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 SEMA3CQ99985 751 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 BOCQ9BWV1 1114 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 TRIM5Q9C035 493 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 TCEAL2Q9H3H9 227 aaPredicted RBP13.1□□□□□ -0.31
ATRX-208ENST00000622960 PADI4Q9UM07 663 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 AKAP13Q12802 2813 aa13.1□□□□□ -0.31
ATRX-208ENST00000622960 FRYQ5TBA9 3013 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 TTC24A2A3L6 582 aaPredicted RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 TAF4O00268 1085 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 TNFRSF10CO14798 259 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 MATN3O15232 486 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 YY2O15391 372 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 SPOPO43791 374 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 CSO75390 466 aaKnown RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 GCATO75600 419 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 TCEA3O75764 348 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 HEXIM1O94992 359 aaKnown RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 PGLSO95336 258 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 KRT1P04264 644 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 CAPNS1P04632 268 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 PYGLP06737 847 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 MYCLP1P12525 358 aaPredicted RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 ZFXP17010 805 aaPredicted RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 ZNF30P17039 623 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 CR2P20023 1033 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 TRAF2Q12933 501 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 BIRC2Q13490 618 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 SPIDRQ14159 915 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 TCEA2Q15560 299 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 RAET1GQ6H3X3 334 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 RBM44Q6ZP01 1051 aaKnown RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 TAF8Q7Z7C8 310 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATRX-208ENST00000622960 PCDH19Q8TAB3 1148 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 SLC35G2Q8TBE7 412 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 SCRN2Q96FV2 425 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 PDXPQ96GD0 296 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 SPTLC3Q9NUV7 552 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 RBM22Q9NW64 420 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATRX-208ENST00000622960 DDX56Q9NY93 547 aaKnown RBP13.09□□□□□ -0.31
ATRX-208ENST00000622960 SIRPGQ9P1W8 387 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 GPR34Q9UPC5 381 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 RAI2Q9Y5P3 530 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 DGKBQ9Y6T7 804 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 SHROOM3Q8TF72 1996 aa13.09□□□□□ -0.31
ATRX-208ENST00000622960 APOL1O14791 398 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 PPP1R12AO14974 1030 aaPredicted RBP13.08□□□□□ -0.32
ATRX-208ENST00000622960 ZW10O43264 779 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 USP12O75317 370 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.32
ATRX-208ENST00000622960 PEX11BO96011 259 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 HOXC4P09017 264 aaPredicted RBP13.08□□□□□ -0.32
ATRX-208ENST00000622960 MYF5P13349 255 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 CCNB1P14635 433 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 KDELR1P24390 212 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 SLC1A1P43005 524 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.32
ATRX-208ENST00000622960 TAS2R40P59535 323 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 CNGA3Q16281 694 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 PNCKQ6P2M8 343 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 VSIG1Q86XK7 387 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 RHOT1Q8IXI2 618 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 SLC35F3Q8IY50 421 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 CCDC13Q8IYE1 715 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 PGBD5Q8N414 524 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 TEX26Q8N6G2 289 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 PLA2G15Q8NCC3 412 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 HNRNPLLQ8WVV9 542 aaKnown RBP13.08□□□□□ -0.32
ATRX-208ENST00000622960 FATE1Q969F0 183 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 FUBP1Q96AE4 644 aaKnown RBP13.08□□□□□ -0.32
ATRX-208ENST00000622960 HDAC11Q96DB2 347 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 DTD2Q96FN9 168 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 COQ10AQ96MF6 247 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 TSGA13Q96PP4 275 aa13.08□□□□□ -0.32
ATRX-208ENST00000622960 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms