RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 REXO4Q9GZR2 422 aaKnown RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 FZD10Q9ULW2 581 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 KLHL20Q9Y2M5 609 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PDZK1P1A8MUH7 402 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PRR23D1E9PI22 279 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 H0YGN5 161 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 HCRTO43612 131 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 ZBTB11O95625 1053 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PRR23D2P0DMB1 279 aaPredicted RBP16.19■□□□□ 0.18
GABRB3-215ENST00000622697 PLCL1Q15111 1095 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 ABRAXAS1Q6UWZ7 409 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 SETD9Q8NE22 299 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 UCMAQ8WVF2 138 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 C19orf60Q96EN9 201 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 NFS1Q9Y697 457 aa16.19■□□□□ 0.18
GABRB3-215ENST00000622697 SPATA31D3P0C874 917 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 POLD2P49005 469 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ARMC6Q6NXE6 501 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 SPATA31D4Q6ZUB0 917 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 DCAKDQ8WVC6 231 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 COL1A2P08123 1366 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 FAM220BPB1ANY3 271 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 TRAFD1O14545 582 aaPredicted RBP16.18■□□□□ 0.18
GABRB3-215ENST00000622697 C22orf31O95567 290 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 L1CAMP32004 1257 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 AIF1P55008 147 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ACSBG2Q5FVE4 666 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 LRRC49Q8IUZ0 686 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 MAGEC3Q8TD91 643 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 MCRS1Q96EZ8 462 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 PPEF2O14830 753 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 MAGEC1O60732 1142 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ALOX12P18054 663 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 GPX6P59796 221 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 NCF4Q15080 339 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 SYPL2Q5VXT5 272 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 SSU72Q9NP77 194 aaKnown RBP16.18■□□□□ 0.18
GABRB3-215ENST00000622697 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
GABRB3-215ENST00000622697 SLC22A3O75751 556 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 CYP7B1O75881 506 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 FGF1P05230 155 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 CHRNGP07510 517 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 CYP4B1P13584 511 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ABRQ12979 859 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 TUSC3Q13454 348 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 SETMARQ53H47 684 aaPredicted RBP16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ZYG11AQ6WRX3 759 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 LPGAT1Q92604 370 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 PPM1MQ96MI6 270 aa16.18■□□□□ 0.18
GABRB3-215ENST00000622697 ITM2AO43736 263 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 MTA1Q13330 715 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 PLEKHG4BQ96PX9 1271 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 DGKKQ5KSL6 1271 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 MFSD4BQ5TF39 518 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 LINGO4Q6UY18 593 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 FSTL5Q8N475 847 aaPredicted RBP16.17■□□□□ 0.18
GABRB3-215ENST00000622697 SVOPQ8N4V2 548 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 RGPD2P0DJD1 1756 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 ABCC6O95255 1503 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 AHCYL1O43865 530 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 IDO1P14902 403 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 EIF2B2P49770 351 aaKnown RBP16.17■□□□□ 0.18
GABRB3-215ENST00000622697 OSBPL11Q9BXB4 747 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 TMEM39AQ9NV64 488 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 PMM2O15305 246 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 LYNP07948 512 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 OLIG2Q13516 323 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 FBXL18Q96ME1 805 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 HMX1Q9NP08 348 aaPredicted RBP16.17■□□□□ 0.18
GABRB3-215ENST00000622697 PADI3Q9ULW8 664 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 CAB39Q9Y376 341 aaPredicted RBP16.17■□□□□ 0.18
GABRB3-215ENST00000622697 VCLP18206 1134 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 CASP12Q6UXS9 341 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 UTS2BQ765I0 119 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 ZNF605Q86T29 641 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 ESAMQ96AP7 390 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 HNRNPABQ99729 332 aaKnown RBP16.17■□□□□ 0.18
GABRB3-215ENST00000622697 SNX6Q9UNH7 406 aa16.17■□□□□ 0.18
GABRB3-215ENST00000622697 ANXA6P08133 673 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 CHRNA4P43681 627 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 B3GALT6Q96L58 329 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PPP3R2Q96LZ3 170 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 TEKT5Q96M29 485 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 MRPL17Q9NRX2 175 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PNPLA3Q9NST1 481 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 C9IYK1 514 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 RECQL5O94762 991 aaPredicted RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 OR1D2P34982 312 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 PRKAG1P54619 331 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 GJA9P57773 515 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 CYP4F2P78329 520 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 CYP4F3Q08477 520 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ZNF549Q6P9A3 640 aa16.16■□□□□ 0.18
GABRB3-215ENST00000622697 ZC3H7AQ8IWR0 971 aaKnown RBP16.16■□□□□ 0.18
GABRB3-215ENST00000622697 OR52E6Q96RD3 313 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms