RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SERPINB9P50453 376 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 ACTR2P61160 394 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 PSMC6P62333 389 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 HTRA3P83110 453 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TRAP1Q12931 704 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 PLA2G4FQ68DD2 849 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 STYK1Q6J9G0 422 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 SPOCD1Q6ZMY3 1216 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 BBS12Q6ZW61 710 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 CELF2-AS1Q8N7Q2 184 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 CANT1Q8WVQ1 401 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TIFAQ96CG3 184 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 NXNL1Q96CM4 212 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 DSN1Q9H410 356 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 EPS8L2Q9H6S3 715 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 NTN4Q9HB63 628 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 MRPL47Q9HD33 250 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 TNFRSF10DQ9UBN6 386 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 CCDC163A0A0D9SF12 145 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TCRBV3S1A0A5B6 114 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 G3V3G9 751 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 E2F3O00716 465 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 DLGAP1O14490 977 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 RNGTTO60942 597 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 TADA2AO75478 443 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TFE3P19532 575 aaPredicted RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 PROZP22891 400 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 GRK3P35626 688 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 ZNF76P36508 570 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 IL12RB1P42701 662 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 MAPK12P53778 367 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 LRRC74AQ0VAA2 488 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 EPC2Q52LR7 807 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 DCAF8Q5TAQ9 597 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 FAXCQ5TGI0 409 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 C12orf60Q5U649 245 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 METTL11BQ5VVY1 283 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 XAF1Q6GPH4 301 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 C15orf52Q6ZUT6 534 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 SPATC1Q76KD6 591 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 ZNF781Q8N8C0 355 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 IL17RDQ8NFM7 739 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 MAGEE2Q8TD90 523 aaPredicted RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 DPEP3Q9H4B8 488 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TUFT1Q9NNX1 390 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 AGPAT3Q9NRZ7 376 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 SIRT5Q9NXA8 310 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 KAT6AQ92794 2004 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 LAMB2P55268 1798 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 A6NJY4 79 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TRPC5OSA6NMA1 111 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 EI24O14681 340 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TRDMT1O14717 391 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 BET1O15155 118 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TLR3O15455 904 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 PLIN3O60664 434 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 HTR3AP46098 478 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 HARS2P49590 506 aaKnown RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 VAMP7P51809 220 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 GDF10P55107 478 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 GEN1Q17RS7 908 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TBRG1Q3YBR2 411 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TOR2AQ5JU69 321 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 CATSPEREQ5SY80 951 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 NOXA1Q86UR1 476 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 AMIGO1Q86WK6 493 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 PLD3Q8IV08 490 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 ADGRG5Q8IZF4 528 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 CNTD1Q8N815 330 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 ST13P5Q8NFI4 369 aaPredicted RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 MCFD2Q8NI22 146 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 DEPDC1BQ8WUY9 529 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 FKBP10Q96AY3 582 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 LRRC39Q96DD0 335 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 EYA3Q99504 573 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 LPIN3Q9BQK8 851 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 ASPSCR1Q9BZE9 553 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 CCDC90BQ9GZT6 254 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 SOX17Q9H6I2 414 aaPredicted RBP7.94□□□□□ -1.14
VPS11-209ENST00000622309 RRAGCQ9HB90 399 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 OAZ3Q9UMX2 235 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 TEX264Q9Y6I9 313 aa7.94□□□□□ -1.14
VPS11-209ENST00000622309 SLC22A2O15244 555 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 SLITRK5O94991 958 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PDGFAP04085 211 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 IFNA16P05015 189 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 DPEP1P16444 411 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 DDOSTP39656 456 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 CCNA1P78396 465 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 BNC1Q01954 994 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 INPP5AQ14642 412 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 PCLAFQ15004 111 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 NFIL3Q16649 462 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 TFDP3Q5H9I0 405 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 COLEC12Q5KU26 742 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 SLC16A12Q6ZSM3 486 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 DDIASQ8IXT1 998 aa7.93□□□□□ -1.14
VPS11-209ENST00000622309 NAT16Q8N8M0 369 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms