RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 CAPN8A6NHC0 703 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 SLC30A4O14863 429 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 OPHN1O60890 802 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 RECQL5O94762 991 aaPredicted RBP18.33■□□□□ 0.52
LITAF-220ENST00000620789 MSNP26038 577 aaKnown RBP18.33■□□□□ 0.52
LITAF-220ENST00000620789 CXCR5P32302 372 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 IGFALSP35858 605 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 CDK18Q07002 472 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ARHGEF7Q14155 803 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 LRRC14Q15048 493 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 PCSK7Q16549 785 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ZNF423Q2M1K9 1284 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ANKRD20A2Q5SQ80 823 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ANKRD20A1Q5TYW2 823 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ANKRD20A3Q5VUR7 823 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ITPRIPL1Q6GPH6 555 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 OR13H1Q8NG92 308 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ATG4AQ8WYN0 398 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 IFT43Q96FT9 208 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 SPATA13Q96N96 652 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 SMIM14Q96QK8 99 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 GBA3Q9H227 469 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 GDF3Q9NR23 364 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 UBP1Q9NZI7 540 aa18.33■□□□□ 0.52
LITAF-220ENST00000620789 ANKRD66B4E2M5 251 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 F5H423 210 aaPredicted RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 PSMD11O00231 422 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 LIASO43766 372 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 CEP104O60308 925 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 PMPCBO75439 489 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 FGGP02679 453 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 GM2AP17900 193 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 RABIFP47224 123 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 GALNT3Q14435 633 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 ACOX1Q15067 660 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 IRF4Q15306 451 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 QPCTQ16769 361 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 WSCD2Q2TBF2 565 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 UAP1L1Q3KQV9 507 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 CRTC1Q6UUV9 634 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 KDELC1Q6UW63 502 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 Q6ZSR6 202 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 KDELC2Q7Z4H8 507 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 PTAR1Q7Z6K3 402 aaPredicted RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 TSPAN33Q86UF1 283 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 SPATS2Q86XZ4 545 aaKnown RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 CBARPQ8N350 705 aaPredicted RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 RMDN1Q96DB5 314 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 OXNAD1Q96HP4 312 aaPredicted RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 COQ10AQ96MF6 247 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 LYSMD1Q96S90 227 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 MLPHQ9BV36 600 aaPredicted RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 ERVMER34-1Q9H9K5 563 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 IL21RQ9HBE5 538 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 MBNL1Q9NR56 388 aaKnown RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 GPR27Q9NS67 375 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 DLL3Q9NYJ7 618 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 FNDC3AQ9Y2H6 1198 aaKnown RBP18.32■□□□□ 0.52
LITAF-220ENST00000620789 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.32■□□□□ 0.52
LITAF-220ENST00000620789 TMEM131Q92545 1883 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 SPTBN4Q9H254 2564 aa18.32■□□□□ 0.52
LITAF-220ENST00000620789 C5orf60A6NFR6 353 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 DFNA5O60443 496 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
LITAF-220ENST00000620789 ZNF883P0CG24 379 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 ZNF30P17039 623 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 WNT3AP56704 352 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 PFN3P60673 137 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 MPP3Q13368 585 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 SIX1Q15475 284 aaPredicted RBP18.31■□□□□ 0.52
LITAF-220ENST00000620789 OASLQ15646 514 aaKnown RBP18.31■□□□□ 0.52
LITAF-220ENST00000620789 LRRC66Q68CR7 880 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 DENND2CQ68D51 928 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 DCP2Q8IU60 420 aaKnown RBP18.31■□□□□ 0.52
LITAF-220ENST00000620789 SLC22A18ASQ8N1D0 253 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 FAM71DQ8N9W8 422 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 CCDC110Q8TBZ0 833 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 MAIP1Q8WWC4 291 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 C1orf54Q8WWF1 131 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 ELF4Q99607 663 aaPredicted RBP18.31■□□□□ 0.52
LITAF-220ENST00000620789 RTKNQ9BST9 563 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 TMEM121Q9BTD3 319 aa18.31■□□□□ 0.52
LITAF-220ENST00000620789 DNAH14Q0VDD8 3507 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 A0A0U1RQS6 177 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 TOR1BO14657 336 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 ANXA9O76027 345 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 NDST3O95803 873 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 PSMB4P28070 264 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 GDF10P55107 478 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 SLC14A1Q13336 389 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 CCDC70Q6NSX1 233 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 KDM7AQ6ZMT4 941 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 HSD11B1LQ7Z5J1 315 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 OXR1Q8N573 874 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 NUS1Q96E22 293 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 PBKQ96KB5 322 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 MRGPRX2Q96LB1 330 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 GORASP1Q9BQQ3 440 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 TM7SF3Q9NS93 570 aa18.3■□□□□ 0.52
LITAF-220ENST00000620789 KCTD5Q9NXV2 234 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms