RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FEM1CQ96JP0 617 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 UBXN10Q96LJ8 280 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 C9orf16Q9BUW7 83 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 TRIM15Q9C019 465 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 EGFL7Q9UHF1 273 aa19.64■□□□□ 0.73
PDLIM3-212ENST00000620787 GABRDO14764 452 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 VARSP26640 1264 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 DCKP27707 260 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 HMOX2P30519 316 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 OXTRP30559 389 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 CD97P48960 835 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 CCT8P50990 548 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 GEMP55040 296 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ACAP2Q15057 778 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 SLC14A2Q15849 920 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 UGT3A2Q3SY77 523 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 SPRED1Q7Z699 444 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ZNF420Q8TAQ5 688 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 GIPC3Q8TF64 312 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 FBXL20Q96IG2 436 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 HOPXQ9BPY8 73 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 MROH8Q9H579 483 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ELP3Q9H9T3 547 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 BOLA2-SMG1P6H3BVE0 249 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 FXYD1O00168 92 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ACOX3O15254 700 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 TPST1O60507 370 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 PMPCBO75439 489 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 CLIC3O95833 236 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 IL10P22301 178 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 FASP25445 335 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ETFBP38117 255 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ADCYAP1R1P41586 468 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 BAG6P46379 1132 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 CLCN5P51795 746 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 YBX1P67809 324 aaKnown RBP19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 RAB39AQ14964 217 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ZNF678Q5SXM1 525 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 PRMT9Q6P2P2 845 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ADGRG5Q8IZF4 528 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ATPAF2Q8N5M1 289 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 SEPT8Q92599 483 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 L3HYPDHQ96EM0 354 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 CENPNQ96H22 339 aaPredicted RBP19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 MYRFLQ96LU7 910 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 TRMOQ9BU70 441 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ATXN3LQ9H3M9 355 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 AKTIPQ9H8T0 292 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 ENTPD7Q9NQZ7 604 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 OAZ3Q9UMX2 235 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
PDLIM3-212ENST00000620787 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 GIPC1O14908 333 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 RASAL1O95294 804 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 TFPTP0C1Z6 253 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 CAPN3P20807 821 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 PSMA4P25789 261 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 KCNC1P48547 511 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 KIF19Q2TAC6 998 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 FAM35AQ86V20 835 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 MINDY1Q8N5J2 469 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 GOLM1Q8NBJ4 401 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 TBC1D15Q8TC07 691 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 CYGBQ8WWM9 190 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 MRGPRX2Q96LB1 330 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 CMTM6Q9NX76 183 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 NDUFAF1Q9Y375 327 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 COL4A4P53420 1690 aaPredicted RBP19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 RNF103-CHMP3A0A140T963 221 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 DARSP14868 501 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 NAA20P61599 178 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 BNIP2Q12982 314 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 UNC50Q53HI1 259 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 AARS2Q5JTZ9 985 aaKnown RBP19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 GPR107Q5VW38 600 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 RANBP10Q6VN20 620 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 KDELC2Q7Z4H8 507 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 TAC4Q86UU9 113 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 PNPLA1Q8N8W4 532 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 ACTR3BQ9P1U1 418 aa19.62■□□□□ 0.73
PDLIM3-212ENST00000620787 A0A1W2PPW3 197 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TRIM64BA6NI03 449 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 MAFKO60675 156 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 SUPT7LO94864 414 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 HLA-DQB2P05538 268 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 C7P10643 843 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 LEPRP48357 1165 aaKnown RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 CBX3Q13185 183 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 CAPRIN1Q14444 709 aaKnown RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 VPS26BQ4G0F5 336 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 NOMO2Q5JPE7 1267 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 HECTD2Q5U5R9 776 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 ANKRD23Q86SG2 305 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 ZBTB8BQ8NAP8 495 aaPredicted RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 THAP11Q96EK4 314 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 FSD1LQ9BXM9 530 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 PRKD2Q9BZL6 878 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 ALG9Q9H6U8 611 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 CD320Q9NPF0 282 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TBC1D23Q9NUY8 699 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms