RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 PURAQ00577 322 aaKnown RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 CPSF6Q16630 551 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 LSM12Q3MHD2 195 aaKnown RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 FNBP1LQ5T0N5 605 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 LCLAT1Q6UWP7 414 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 VITQ6UXI7 678 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 RINLQ6ZS11 566 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 EIF3MQ7L2H7 374 aaKnown RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 DBF4BQ8NFT6 615 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 AARSD1Q9BTE6 412 aaKnown RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ARMCX1Q9P291 453 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 PIPSLA2A3N6 862 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 RPP40O75818 363 aaKnown RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 UBOX5O94941 541 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 LRATO95237 230 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF844Q08AG5 666 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 RAB30Q15771 203 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 XKR4Q5GH76 650 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 TCEAL5Q5H9L2 206 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF248Q8NDW4 579 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ZNF563Q8TA94 476 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 BTBD10Q9BSF8 475 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 FUT8Q9BYC5 575 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 BCL2L14Q9BZR8 327 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ZDHHC4Q9NPG8 344 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ADGRB2O60241 1585 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 H3BNH8 94 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ITPKAP23677 461 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 AKT2P31751 481 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 SSR2P43308 183 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 PTPN9P43378 593 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 ADRM1Q16186 407 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 TRMT5Q32P41 509 aaKnown RBP11.4□□□□□ -0.58
CLIP1-219ENST00000620786 FAM129CQ86XR2 697 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 AIF1LQ9BQI0 150 aa11.4□□□□□ -0.58
CLIP1-219ENST00000620786 TGFB1I1O43294 461 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 GMFGO60234 142 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 LINC00032P0C843 101 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 ME2P23368 584 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 USP4Q13107 963 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 ARSHQ5FYA8 562 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 TRAF7Q6Q0C0 670 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 IZUMO2Q6UXV1 221 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 DENND6AQ8IWF6 608 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 ZBTB2Q8N680 514 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 C2orf15Q8WU43 125 aaKnown RBP11.4□□□□□ -0.59
CLIP1-219ENST00000620786 ATXN2LQ8WWM7 1075 aaKnown RBP11.4□□□□□ -0.59
CLIP1-219ENST00000620786 C19orf60Q96EN9 201 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 P2RY11Q96G91 374 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.59
CLIP1-219ENST00000620786 H0YC42 278 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ARVCFO00192 962 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 PDE5AO76074 875 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 GNSP15586 552 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 RHOQP17081 205 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ITPKBP27987 946 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 MAT2AP31153 395 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ATP12AP54707 1039 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 FAM171BQ6P995 826 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 GCNT7Q6ZNI0 430 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 BBS12Q6ZW61 710 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 OTOP3Q7RTS5 596 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CIR1Q86X95 450 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 PCDH20Q8N6Y1 951 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 OR6Y1Q8NGX8 325 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 PPCDCQ96CD2 204 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 DPEP2Q9H4A9 486 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 RPS6KA6Q9UK32 745 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 FCF1Q9Y324 198 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 TRIM24O15164 1050 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 FFAR2O15552 330 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CDH3P22223 829 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 NAGLUP54802 743 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ILF3Q12906 894 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CYB5D1Q6P9G0 228 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CLP1Q92989 425 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 PCED1BQ96HM7 432 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CEP44Q9C0F1 390 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 KCTD5Q9NXV2 234 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 A0A1W2PQ67 120 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 SLC28A2O43868 658 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 CDK14O94921 469 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 IGFALSP35858 605 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 KPNB1Q14974 876 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 MAPKAPK3Q16644 382 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 TMC5Q6UXY8 1006 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 TMPRSS11BQ86T26 416 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 MCEMP1Q8IX19 187 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 GDPD5Q8WTR4 605 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 RMND5BQ96G75 393 aaPredicted RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 IL12RB2Q99665 862 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 EBNA1BP2Q99848 306 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 LMAN2LQ9H0V9 348 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 NEK6Q9HC98 313 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 HBS1LQ9Y450 684 aaKnown RBP11.39□□□□□ -0.59
CLIP1-219ENST00000620786 ROBO3Q96MS0 1386 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 SCAMP1O15126 338 aa11.39□□□□□ -0.59
CLIP1-219ENST00000620786 MRPS35P82673 323 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms