RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	WDR59	Q6PJI9	974 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	UBE2R2	Q712K3	238 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAM124A	Q86V42	546 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GPR180	Q86V85	440 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZBTB2	Q8N680	514 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	C12orf50	Q8NA57	414 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SUN3	Q8TAQ9	357 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FBXO25	Q8TCJ0	367 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	KAT5	Q92993	513 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	C5orf34	Q96MH7	638 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CDT1	Q9H211	546 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GDF3	Q9NR23	364 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	FAM105A	Q9NUU6	356 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	CALML5	Q9NZT1	146 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	RCOR3	Q9P2K3	495 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	COPS7A	Q9UBW8	275 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	DMGDH	Q9UI17	866 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	IRAK3	Q9Y616	596 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TRIM38	O00635	465 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	RPP40	O75818	363 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	PTPN2	P17706	415 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	BLK	P51451	505 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	LARS2	Q15031	903 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	OTUD3	Q5T2D3	398 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	AZIN2	Q96A70	460 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SLC47A1	Q96FL8	570 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SNRNP25	Q9BV90	132 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GMPPB	Q9Y5P6	360 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ATRN	O75882	1429 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	GLYATL1P3	A0A0U1RQE8	302 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	PRODH	O43272	600 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TLR5	O60602	858 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	TNFRSF8	P28908	595 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	MATK	P42679	507 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	BROX	Q5VW32	411 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	POTEH	Q6S545	545 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	DCAKD	Q8WVC6	231 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	MUC13	Q9H3R2	512 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SGK2	Q9HBY8	427 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	BPIFA1	Q9NP55	256 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	SPAG4	Q9NPE6	437 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	DUS2	Q9NX74	493 aa	Known RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	NUDT4	Q9NZJ9	180 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	ARHGAP20	Q9P2F6	1191 aa		7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	COL5A2	P05997	1499 aa	Predicted RBP	7.38	□□□□□ -1.23
PCDH15-231	ENST00000617271	RGSL1	A5PLK6	1076 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	KCNK1	O00180	336 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	PSMD10	O75832	226 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	PGK1	P00558	417 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ASL	P04424	464 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	CLU	P10909	449 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ALOX12	P18054	663 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	SSR2	P43308	183 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	MASP1	P48740	699 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	NUMB	P49757	651 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ACLY	P53396	1101 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ITGA7	Q13683	1181 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	CRTC3	Q6UUV7	619 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	C1orf186	Q6ZWK4	172 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	CCDC80	Q76M96	950 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ADGRA1	Q86SQ6	560 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	NPAS4	Q8IUM7	802 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	NRSN1	Q8IZ57	195 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	UNC5B	Q8IZJ1	945 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	RASGEF1A	Q8N9B8	481 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ZNF75CP	Q92670	426 aa	Predicted RBP	7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	SLC35C1	Q96A29	364 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	LINGO1	Q96FE5	620 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	RNF157	Q96PX1	679 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	KCNMB3	Q9NPA1	279 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	IL17RB	Q9NRM6	502 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	CCDC167	Q9P0B6	97 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	C3orf18	Q9UK00	162 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	VSTM5	A8MXK1	200 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	CCL16	O15467	120 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	LIAS	O43766	372 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	SNAP91	O60641	907 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	RARA	P10276	462 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	TCF4	P15884	667 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	KCNA5	P22460	613 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	SLC20A2	Q08357	652 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	SUZ12	Q15022	739 aa	Known RBP	7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	TARBP2	Q15633	366 aa	Known RBP	7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	LIPM	Q5VYY2	423 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	C9orf57	Q5W0N0	161 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	TAPT1	Q6NXT6	567 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	TMC3	Q7Z5M5	1100 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	KIAA0319L	Q8IZA0	1049 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	FBXO30	Q8TB52	745 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	ETNPPL	Q8TBG4	499 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	FEM1C	Q96JP0	617 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	DEFB118	Q96PH6	123 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	SLC35C2	Q9NQQ7	365 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	DNAJC11	Q9NVH1	559 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	PCCB	P05166	539 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	CDH4	P55283	916 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	STXBP1	P61764	594 aa	Known RBP	7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	RAB30	Q15771	203 aa		7.37	□□□□□ -1.23
PCDH15-231	ENST00000617271	PUS10	Q3MIT2	529 aa	Known RBP	7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms