RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 LDB1Q86U70 411 aaPredicted RBP15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ITIH5Q86UX2 942 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 KDM1BQ8NB78 822 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 MOCOSQ96EN8 888 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ANKRD27Q96NW4 1050 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 OR52B2Q96RD2 323 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 MUC3BQ9H195 1237 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 ATP11BQ9Y2G3 1177 aa15.76■□□□□ 0.11
NR1H3-235ENST00000616973 A8MT66 165 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 ZBTB14O43829 449 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 ZMPSTE24O75844 475 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 CD160O95971 181 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 C1RP00736 705 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 STC1P52823 247 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 SMAD3P84022 425 aaKnown RBP15.75■□□□□ 0.11
NR1H3-235ENST00000616973 ARF5P84085 180 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 MXRA7P84157 204 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 KLF10Q13118 480 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 SEMA3AQ14563 771 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 PTPRCAPQ14761 206 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 PABPC1LQ4VXU2 614 aaKnown RBP15.75■□□□□ 0.11
NR1H3-235ENST00000616973 INO80DQ53TQ3 878 aaPredicted RBP15.75■□□□□ 0.11
NR1H3-235ENST00000616973 ACSBG2Q5FVE4 666 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 TMEM207Q6UWW9 146 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 C16orf59Q7L2K0 433 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 CPSF7Q8N684 471 aaKnown RBP15.75■□□□□ 0.11
NR1H3-235ENST00000616973 CCNYL1Q8N7R7 359 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 HJURPQ8NCD3 748 aaPredicted RBP15.75■□□□□ 0.11
NR1H3-235ENST00000616973 ANKRD49Q8WVL7 239 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 WDR60Q8WVS4 1066 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 FAM161BQ96MY7 647 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 TCF12Q99081 682 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 MRPL17Q9NRX2 175 aaKnown RBP15.75■□□□□ 0.11
NR1H3-235ENST00000616973 SPO11Q9Y5K1 396 aa15.75■□□□□ 0.11
NR1H3-235ENST00000616973 E9PBE3 544 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 DCXO43602 365 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 GREM1O60565 184 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 KLHL41O60662 606 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 PIRTP0C851 137 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 DEFB103AP81534 67 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 HTRA3P83110 453 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 CREMQ03060 361 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 TRMT5Q32P41 509 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 LSM12Q3MHD2 195 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 RALGPS1Q5JS13 557 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 AFTPHQ6ULP2 937 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 Q6ZNB5 142 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 FAM217AQ8IXS0 508 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ULK2Q8IYT8 1036 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 KIRREL3Q8IZU9 778 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 PHTF2Q8N3S3 785 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 AGR3Q8TD06 166 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ADAMTS19Q8TE59 1207 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 RMDN1Q96DB5 314 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 SGF29Q96ES7 293 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 FAR2Q96K12 515 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 TACO1Q9BSH4 297 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 AARSD1Q9BTE6 412 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 UNKQ9C0B0 810 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 IL21Q9HBE4 155 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ZNF334Q9HCZ1 680 aaPredicted RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 MAN1C1Q9NR34 630 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 STK39Q9UEW8 545 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 CRYL1Q9Y2S2 319 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ASB3Q9Y575 518 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 TRPC5OSA6NMA1 111 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 C2orf81A6NN90 581 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 BUD23O43709 281 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 TBL1XO60907 577 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 LILRB3O75022 631 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 CIB2O75838 187 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 COX4I1P13073 169 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 GCKP35557 465 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 PPM1AP35813 382 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 NFKB2Q00653 900 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 TIAL1Q01085 375 aaKnown RBP eCLIP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 SATB1Q01826 763 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 C6orf163Q5TEZ5 329 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 GLT6D1Q7Z4J2 308 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ISCA2Q86U28 154 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 MDGA1Q8NFP4 955 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 MAELQ96JY0 434 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 EXOC2Q96KP1 924 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 THTPAQ9BU02 230 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ADGRE3Q9BY15 652 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ZNF385DQ9H6B1 395 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 EML4Q9HC35 981 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 ACSS2Q9NR19 701 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 SMPD4Q9NXE4 827 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 CDYLQ9Y232 598 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 OR51B4Q9Y5P0 310 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 RAI2Q9Y5P3 530 aa15.74■□□□□ 0.11
NR1H3-235ENST00000616973 HELZP42694 1942 aaKnown RBP15.74■□□□□ 0.11
NR1H3-235ENST00000616973 H0Y626 953 aa15.73■□□□□ 0.11
NR1H3-235ENST00000616973 TMCC1O94876 653 aa15.73■□□□□ 0.11
NR1H3-235ENST00000616973 LUC7L3O95232 432 aaKnown RBP15.73■□□□□ 0.11
NR1H3-235ENST00000616973 PSMG1O95456 288 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms