RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SLX4Q8IY92 1834 aa9.47□□□□□ -0.89
CLTCL1-208ENST00000615606 TARSP26639 723 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 TEAD4Q15561 434 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 OLFML1Q6UWY5 402 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 CYP4Z1Q86W10 505 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 BBS7Q8IWZ6 715 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 CNDP1Q96KN2 507 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 RPL10LQ96L21 214 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 KLHL32Q96NJ5 620 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 CATSPER2Q96P56 530 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 RAD21L1Q9H4I0 556 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 SNX15Q9NRS6 342 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 PIGVQ9NUD9 493 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 KLHL28Q9NXS3 571 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 DTLQ9NZJ0 730 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 GJA1P17302 382 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 FECHP22830 423 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 NAGLUP54802 743 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 CHRNB3Q05901 458 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 USP4Q13107 963 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 TMED1Q13445 227 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 TEAD2Q15562 447 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 CA9Q16790 459 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 MBLAC2Q68D91 279 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 MTDHQ86UE4 582 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 TEX9Q8N6V9 391 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 RERGQ96A58 199 aaPredicted RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 ACE2Q9BYF1 805 aaPredicted RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 EIF2B3Q9NR50 452 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 H2AFY2Q9P0M6 372 aaPredicted RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 IGSF9Q9P2J2 1179 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 RPS6KB2Q9UBS0 482 aa9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 VIRMAQ69YN4 1812 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-208ENST00000615606 OTCP00480 354 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 OCM2P0CE71 109 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 OCMP0CE72 109 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 CXCR3P49682 368 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 APTXQ7Z2E3 356 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 PAGE2Q7Z2X7 111 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 GALNT13Q8IUC8 556 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 CPT1BQ92523 772 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 IRF7Q92985 503 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 FAIM2Q9BWQ8 316 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 SNX8Q9Y5X2 465 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 BACE2Q9Y5Z0 518 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 MYH14Q7Z406 1995 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 LBPP18428 481 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 NTSP30990 170 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 FASTKQ14296 549 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 TCEA2Q15560 299 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 CCDC85BQ15834 202 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 ZCCHC23Q6ZST2 131 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 KIAA0408Q6ZU52 694 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 COLGALT2Q8IYK4 626 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 TCAIMQ8N3R3 496 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 DTX3LQ8TDB6 740 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 OTUB2Q96DC9 234 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 HERC2P3Q9BVR0 1158 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 SFXN1Q9H9B4 322 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 CORO1CQ9ULV4 474 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 NDUFAF1Q9Y375 327 aa9.46□□□□□ -0.9
CLTCL1-208ENST00000615606 GSAPA4D1B5 854 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 AKT2P31751 481 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 S100A3P33764 101 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 MLLT6P55198 1093 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 RGS1Q08116 209 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 SPIDRQ14159 915 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ASTE1Q2TB18 679 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 SH3PXD2AQ5TCZ1 1133 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ARCQ7LC44 396 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 MRPL10Q7Z7H8 261 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 SPATA22Q8NHS9 363 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TRPC4APQ8TEL6 797 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ABHD8Q96I13 439 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 WRAP53Q9BUR4 548 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 IMP3Q9NV31 184 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 INTS7Q9NVH2 962 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ATAD3AQ9NVI7 634 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TMCC3Q9ULS5 477 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 H3BM21 787 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TULP2O00295 520 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PRAMEF1O95521 474 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PCCBP05166 539 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ERFP50548 548 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PLOD1Q02809 727 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 UBE3AQ05086 875 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 ILF3Q12906 894 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 AAK1Q2M2I8 961 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 FAM126BQ8IXS8 530 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 KIF2BQ8N4N8 673 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 TSTD1Q8NFU3 115 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 CMASQ8NFW8 434 aaPredicted RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 BRSK1Q8TDC3 778 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 LRRC15Q8TF66 581 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 CLP1Q92989 425 aaKnown RBP9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PPP3R2Q96LZ3 170 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 PWWP2AQ96N64 755 aa9.45□□□□□ -0.9
CLTCL1-208ENST00000615606 YIPF3Q9GZM5 350 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms