RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 LATS1O95835 1130 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 APOC2P02655 101 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SLC4A1P02730 911 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 CSH1P0DML2 217 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 CSH2P0DML3 217 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 NR4A1P22736 598 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 CYP2F1P24903 491 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 L1CAMP32004 1257 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SOX11P35716 441 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 COILP38432 576 aaPredicted RBP8.86□□□□□ -0.99
VPS11-206ENST00000614944 MMP13P45452 471 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SULT1E1P49888 294 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SSTP61278 116 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 ATP6V0D1P61421 351 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 PHC1P78364 1004 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 LRRC74AQ0VAA2 488 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 DPYSL3Q14195 570 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 BSPRYQ5W0U4 402 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 LILRA6Q6PI73 481 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SCD5Q86SK9 330 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 CPNE8Q86YQ8 564 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 CCDC33Q8N5R6 958 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SLC35B2Q8TB61 432 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 RTP4Q96DX8 246 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SLC39A13Q96H72 371 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 SERPINB11Q96P15 392 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 NELL2Q99435 816 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 FERMT1Q9BQL6 677 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 TLR8Q9NR97 1041 aaKnown RBP8.86□□□□□ -0.99
VPS11-206ENST00000614944 GNPTGQ9UJJ9 305 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 TLR6Q9Y2C9 796 aa8.86□□□□□ -0.99
VPS11-206ENST00000614944 A8MU76 341 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 WASH4PA8MWX3 477 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 IRAK2O43187 625 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 INMTO95050 263 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 ACRP10323 421 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 DBTP11182 482 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 YWHAQP27348 245 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 NUDT1P36639 197 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 SLCO1A2P46721 670 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 PTK6Q13882 451 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 CYP2A13Q16696 494 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 TRIM16LQ309B1 348 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 ACSBG2Q5FVE4 666 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 FAM209BQ5JX69 171 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 PGM2L1Q6PCE3 622 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 ARHGAP36Q6ZRI8 547 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 DENND5BQ6ZUT9 1274 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 STK32CQ86UX6 486 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 TCAIMQ8N3R3 496 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 GALNT4Q8N4A0 578 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 ZNF486Q96H40 463 aaPredicted RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 RNF157Q96PX1 679 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 LBHD1Q9BQE6 289 aaPredicted RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 SNRNP25Q9BV90 132 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 EBF3Q9H4W6 596 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 NGRNQ9NPE2 291 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 SLC35C2Q9NQQ7 365 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 MTMR10Q9NXD2 777 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 SENP1Q9P0U3 644 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 FAM172BPA6NC97 362 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 SLC38A8A6NNN8 435 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 KCNU1A8MYU2 1149 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 NDUFA2O43678 99 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 PRMT3O60678 531 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 DNAJB5O75953 348 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 NPPAP01160 153 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 USP17L7P0C7H9 530 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 RALAP11233 206 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 CPB1P15086 417 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 BMP8BP34820 402 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 RAP1GDS1P52306 607 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 PTPN5P54829 565 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 S100A12P80511 92 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 HNRNPDQ14103 355 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 TAF5Q15542 800 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 UAP1Q16222 522 aaPredicted RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 CCDC142Q17RM4 750 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 C5orf22Q49AR2 442 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 OGFOD2Q6N063 350 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 MFSD7Q6UXD7 560 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 ZDHHC14Q8IZN3 488 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 RBM18Q96H35 190 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 C8orf33Q9H7E9 229 aaPredicted RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 RSL24D1Q9UHA3 163 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 SLC7A8Q9UHI5 535 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 ZMYM5Q9UJ78 669 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 GMEB2Q9UKD1 530 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 CDY1Q9Y6F8 540 aa8.85□□□□□ -0.99
VPS11-206ENST00000614944 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.85□□□□□ -0.99
VPS11-206ENST00000614944 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.84□□□□□ -0.99
VPS11-206ENST00000614944 ZSCAN5CA6NGD5 496 aaPredicted RBP8.84□□□□□ -0.99
VPS11-206ENST00000614944 HACD1B0YJ81 288 aa8.84□□□□□ -0.99
VPS11-206ENST00000614944 HNRNPCL2B2RXH8 293 aa8.84□□□□□ -0.99
VPS11-206ENST00000614944 LIASO43766 372 aa8.84□□□□□ -0.99
VPS11-206ENST00000614944 HNRNPCL1O60812 293 aaKnown RBP8.84□□□□□ -0.99
VPS11-206ENST00000614944 CCDC22O60826 627 aa8.84□□□□□ -0.99
VPS11-206ENST00000614944 SULT1C4O75897 302 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms