RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SGF29Q96ES7 293 aa17.92■□□□□ 0.46
SMN2-213ENST00000614240 CMKLR1Q99788 373 aa17.92■□□□□ 0.46
SMN2-213ENST00000614240 TMEM168Q9H0V1 697 aa17.92■□□□□ 0.46
SMN2-213ENST00000614240 SUDS3Q9H7L9 328 aaPredicted RBP17.92■□□□□ 0.46
SMN2-213ENST00000614240 PARVAQ9NVD7 372 aa17.92■□□□□ 0.46
SMN2-213ENST00000614240 AKAP7Q9P0M2 348 aaPredicted RBP17.92■□□□□ 0.46
SMN2-213ENST00000614240 PCDHB11Q9Y5F2 797 aa17.92■□□□□ 0.46
SMN2-213ENST00000614240 RNF215Q9Y6U7 377 aa17.92■□□□□ 0.46
SMN2-213ENST00000614240 EFSO43281 561 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 NOBOXO60393 691 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 LIPCP11150 499 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 PNLIPP16233 465 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 ERCC2P18074 760 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 ITIH1P19827 911 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 MYL5Q02045 173 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 NSUN2Q08J23 767 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMN2-213ENST00000614240 BIRC2Q13490 618 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 MAMLD1Q13495 774 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 RFTN1Q14699 578 aaPredicted RBP17.91■□□□□ 0.46
SMN2-213ENST00000614240 CA9Q16790 459 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
SMN2-213ENST00000614240 MAP9Q49MG5 647 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 MANEAQ5SRI9 462 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 AFMIDQ63HM1 303 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 PPP1R2P3Q6NXS1 205 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 PNCKQ6P2M8 343 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 SPRED1Q7Z699 444 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 ECHDC3Q96DC8 303 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 ERGIC2Q96RQ1 377 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 KCTD15Q96SI1 283 aaPredicted RBP17.91■□□□□ 0.46
SMN2-213ENST00000614240 FAM117AQ9C073 453 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 ACSL6Q9UKU0 697 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 COL6A6A6NMZ7 2263 aa17.91■□□□□ 0.46
SMN2-213ENST00000614240 PRAMEF33A0A0G2JMD5 474 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 NUDT21O43809 227 aaKnown RBP17.9■□□□□ 0.46
SMN2-213ENST00000614240 PRPSAP2O60256 369 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 PRAMEF10O60809 474 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 HOXC4P09017 264 aaPredicted RBP17.9■□□□□ 0.46
SMN2-213ENST00000614240 TRIM23P36406 574 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 AP1S1P61966 158 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 ZFP36L1Q07352 338 aaKnown RBP17.9■□□□□ 0.46
SMN2-213ENST00000614240 IL10RBQ08334 325 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 NFATC3Q12968 1075 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 AMZ1Q400G9 498 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 DENND2CQ68D51 928 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 ARHGAP36Q6ZRI8 547 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 SFTPA2Q8IWL1 248 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 ZSCAN1Q8NBB4 408 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 CCL4L1Q8NHW4 92 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 PDCD6IPQ8WUM4 868 aaKnown RBP17.9■□□□□ 0.46
SMN2-213ENST00000614240 USP7Q93009 1102 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 SNRNP25Q9BV90 132 aaKnown RBP17.9■□□□□ 0.46
SMN2-213ENST00000614240 LGR4Q9BXB1 951 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 CLMPQ9H6B4 373 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 CARS2Q9HA77 564 aaKnown RBP17.9■□□□□ 0.46
SMN2-213ENST00000614240 ANO10Q9NW15 660 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 TAS2R14Q9NYV8 317 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 SEPT3Q9UH03 358 aa17.9■□□□□ 0.46
SMN2-213ENST00000614240 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.89■□□□□ 0.45
SMN2-213ENST00000614240 PRSS38A1L453 326 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 GOLGA6CA6NDK9 693 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 GOLGA6BA6NDN3 693 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 RHPN2P1A8MT19 583 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 ZW10O43264 779 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 ATMINO43313 823 aaPredicted RBP17.89■□□□□ 0.45
SMN2-213ENST00000614240 GOLGA6DP0CG33 693 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 ALDH4A1P30038 563 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 KCNC4Q03721 635 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 ILF3Q12906 894 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMN2-213ENST00000614240 SRSF6Q13247 344 aaKnown RBP17.89■□□□□ 0.45
SMN2-213ENST00000614240 HLTFQ14527 1009 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMN2-213ENST00000614240 ZNF235Q14590 738 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 LBRQ14739 615 aaKnown RBP17.89■□□□□ 0.45
SMN2-213ENST00000614240 TMEM164Q5U3C3 297 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 PIM3Q86V86 326 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 ZFAND4Q86XD8 727 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 ARHGAP12Q8IWW6 846 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 EXD3Q8N9H8 876 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 NUS1Q96E22 293 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 PEBP4Q96S96 227 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 GSDMCQ9BYG8 508 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 PHPT1Q9NRX4 125 aaPredicted RBP17.89■□□□□ 0.45
SMN2-213ENST00000614240 GOLGA6AQ9NYA3 693 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 B4GALT6Q9UBX8 382 aa17.89■□□□□ 0.45
SMN2-213ENST00000614240 TRAFD1O14545 582 aaPredicted RBP17.88■□□□□ 0.45
SMN2-213ENST00000614240 MYCLP1P12525 358 aaPredicted RBP17.88■□□□□ 0.45
SMN2-213ENST00000614240 NFKBIAP25963 317 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 MIPP30301 263 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 ETV5P41161 510 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 TMCO4Q5TGY1 634 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 PLEKHA7Q6IQ23 1121 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 XKR5Q6UX68 686 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 VASH2Q86V25 355 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 NPWQ8N729 165 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 ZDHHC1Q8WTX9 485 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 EXTL1Q92935 676 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 COL26A1Q96A83 441 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 SEMA6CQ9H3T2 930 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 LMBRD1Q9NUN5 540 aa17.88■□□□□ 0.45
SMN2-213ENST00000614240 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms