RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 LRRC19Q9H756 370 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 ANKMY1Q9P2S6 941 aa23.52■■□□□ 1.36
MMP28-203ENST00000612672 IGHV5-10-1A0A0J9YXX1 117 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 CACNB4O00305 520 aaPredicted RBP23.51■■□□□ 1.35
MMP28-203ENST00000612672 EPHB6O15197 1021 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 CREB3O43889 395 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 UNGP13051 313 aaPredicted RBP23.51■■□□□ 1.35
MMP28-203ENST00000612672 TRIM23P36406 574 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 PARP15Q460N3 678 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 BRAT1Q6PJG6 821 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 ZSCAN1Q8NBB4 408 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 CELF6Q96J87 481 aaKnown RBP23.51■■□□□ 1.35
MMP28-203ENST00000612672 CCDC74BQ96LY2 380 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 SUDS3Q9H7L9 328 aaPredicted RBP23.51■■□□□ 1.35
MMP28-203ENST00000612672 FZD10Q9ULW2 581 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 PCDHB11Q9Y5F2 797 aa23.51■■□□□ 1.35
MMP28-203ENST00000612672 SPTAN1Q13813 2472 aaKnown RBP23.51■■□□□ 1.35
MMP28-203ENST00000612672 A8MX80 341 aa23.5■■□□□ 1.35
MMP28-203ENST00000612672 CPNE6O95741 557 aa23.5■■□□□ 1.35
MMP28-203ENST00000612672 SFTPCP11686 197 aa23.5■■□□□ 1.35
MMP28-203ENST00000612672 GPD1P21695 349 aa23.5■■□□□ 1.35
MMP28-203ENST00000612672 CD82P27701 267 aa23.5■■□□□ 1.35
MMP28-203ENST00000612672 TPD52L1Q16890 204 aaPredicted RBP23.5■■□□□ 1.35
MMP28-203ENST00000612672 TSEN2Q8NCE0 465 aaKnown RBP23.5■■□□□ 1.35
MMP28-203ENST00000612672 ECHDC3Q96DC8 303 aa23.5■■□□□ 1.35
MMP28-203ENST00000612672 ZNF641Q96N77 438 aaPredicted RBP23.5■■□□□ 1.35
MMP28-203ENST00000612672 TCRBV5S1A1TA0A578 114 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 PRSS38A1L453 326 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 STMND1H3BQB6 276 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 TNFRSF10CO14798 259 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 PRAMEF11O60813 436 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 FGF1P05230 155 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 KRT3P12035 628 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 LIFP15018 202 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 AK4P27144 223 aaPredicted RBP23.49■■□□□ 1.35
MMP28-203ENST00000612672 CD1CP29017 333 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 CSF2RBP32927 897 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 GSCP56915 257 aaPredicted RBP23.49■■□□□ 1.35
MMP28-203ENST00000612672 NR1D2Q14995 579 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 DPCR1Q3MIW9 517 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 SRLQ86TD4 932 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 ZNF677Q86XU0 584 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 MLKLQ8NB16 471 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 ZNF564Q8TBZ8 553 aaPredicted RBP23.49■■□□□ 1.35
MMP28-203ENST00000612672 GPBAR1Q8TDU6 330 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 SAMSN1Q9NSI8 373 aaKnown RBP23.49■■□□□ 1.35
MMP28-203ENST00000612672 GPATCH2LQ9NWQ4 482 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 TMEM9Q9P0T7 183 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 MOSPD1Q9UJG1 213 aa23.49■■□□□ 1.35
MMP28-203ENST00000612672 PES1O00541 588 aaKnown RBP23.48■■□□□ 1.35
MMP28-203ENST00000612672 HOXC4P09017 264 aaPredicted RBP23.48■■□□□ 1.35
MMP28-203ENST00000612672 ELFN1P0C7U0 828 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 CCNB1P14635 433 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 ALDH4A1P30038 563 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 POLE2P56282 527 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 JAM2P57087 298 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 IGFBP7Q16270 282 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 NKAIN2Q5VXU1 208 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 AFMIDQ63HM1 303 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 SCYL2Q6P3W7 929 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 ARHGAP36Q6ZRI8 547 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 DPPA4Q7L190 304 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 PIM3Q86V86 326 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 ZDHHC1Q8WTX9 485 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 B3GNT4Q9C0J1 378 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 WDR26Q9H7D7 661 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 B3GALT1Q9Y5Z6 326 aa23.48■■□□□ 1.35
MMP28-203ENST00000612672 CFAP69A5D8W1 941 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 TEX33O43247 280 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 ECEL1O95672 775 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 MPSTP25325 297 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 UGT1A3P35503 534 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 RPL7AP62424 266 aaKnown RBP23.47■■□□□ 1.35
MMP28-203ENST00000612672 KCNAB2Q13303 367 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 CFAP58Q5T655 872 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 PNCKQ6P2M8 343 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 BORAQ6PGQ7 559 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 FAM114A1Q8IWE2 563 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 TUBGCP5Q96RT8 1024 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 SLC39A8Q9C0K1 460 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 CARS2Q9HA77 564 aaKnown RBP23.47■■□□□ 1.35
MMP28-203ENST00000612672 TAB2Q9NYJ8 693 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 TAAR2Q9P1P5 351 aa23.47■■□□□ 1.35
MMP28-203ENST00000612672 TTC24A2A3L6 582 aaPredicted RBP23.46■■□□□ 1.35
MMP28-203ENST00000612672 CLEC18AA5D8T8 446 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 TRAFD1O14545 582 aaPredicted RBP23.46■■□□□ 1.35
MMP28-203ENST00000612672 CEACAM5P06731 702 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 PAPOLAP51003 745 aaKnown RBP23.46■■□□□ 1.35
MMP28-203ENST00000612672 OGDHQ02218 1023 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 GRM3Q14832 879 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 CLEC18BQ6UXF7 455 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 CLEC18CQ8NCF0 446 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 C3orf20Q8ND61 904 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 COQ10AQ96MF6 247 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 TAAR9Q96RI9 348 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 SELENOOQ9BVL4 669 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 ADNPQ9H2P0 1102 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 ADAM22Q9P0K1 906 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 B4GALT6Q9UBX8 382 aa23.46■■□□□ 1.35
MMP28-203ENST00000612672 PLEKHM1Q9Y4G2 1056 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms