RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 SOCS5O75159 536 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF821O75541 412 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 IGSF6O95976 241 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 AHSGP02765 367 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ALDOAP04075 364 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SRCP12931 536 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HOXB8P17481 243 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TYK2P29597 1187 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CRHR1P34998 444 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CTSOP43234 321 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 POLD2P49005 469 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SERPINB8P50452 374 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 RPL26P61254 145 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SNRPD1P62314 119 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 PRAMEP78395 509 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ECT2LQ008S8 904 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ACVR1Q04771 509 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 BCL2L1Q07817 233 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CTBP1Q13363 440 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TAF1AQ15573 450 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 EML3Q32P44 896 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 DGKKQ5KSL6 1271 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ARMC12Q5T9G4 340 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SYCE2Q6PIF2 218 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF771Q7L3S4 317 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 GET4Q7L5D6 327 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ADIPOR2Q86V24 386 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ZC3HC1Q86WB0 502 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 AHI1Q8N157 1196 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 NDUFAF2Q8N183 169 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 DCLK2Q8N568 766 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 C2CD4AQ8NCU7 369 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 OR2AP1Q8NGE2 309 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 GDAP1Q8TB36 358 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 PDCD6IPQ8WUM4 868 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ATP2A3Q93084 1043 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HDAC10Q969S8 669 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ISL2Q96A47 359 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 RSPRY1Q96DX4 576 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 VPS39Q96JC1 886 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CABS1Q96KC9 395 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 RPL10LQ96L21 214 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SRPK1Q96SB4 655 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 APOL5Q9BWW9 433 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SLC13A1Q9BZW2 595 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CEP44Q9C0F1 390 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 MFSD1Q9H3U5 465 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 RHOJQ9H4E5 214 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 PCMTD2Q9NV79 361 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HACD3Q9P035 362 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 DCDC2Q9UHG0 476 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 RPL26L1Q9UNX3 145 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 MTO1Q9Y2Z2 717 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 PLLPQ9Y342 182 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 KCTD3Q9Y597 815 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ARL5AQ9Y689 179 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CDH23Q9H251 3354 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 HEPACAM2A8MVW5 462 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 LINC01565O15544 149 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 HTRA2O43464 458 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 RPP40O75818 363 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PGLSO95336 258 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 NFATC1O95644 943 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GSRP00390 522 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 CYP17A1P05093 508 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PRKCGP05129 697 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 MPOP05164 745 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 VIMP08670 466 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PIRTP0C851 137 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ADH5P11766 374 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 POLR2EP19388 210 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 LPOP22079 712 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PSMA3P25788 255 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GABRB3P28472 473 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 SLC1A2P43004 574 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ETV4P43268 484 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 MAGEA12P43365 314 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GRIA4P48058 902 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 LEPRP48357 1165 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 STK19P49842 368 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ARSDP51689 593 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 EPHB1P54762 984 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ILF2Q12905 390 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ADAM15Q13444 863 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PDE1CQ14123 709 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 QPCTQ16769 361 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 MYLK3Q32MK0 819 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ATAT1Q5SQI0 421 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 MBLAC2Q68D91 279 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF470Q6ECI4 717 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 C22orf39Q6P5X5 142 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GLT6D1Q7Z4J2 308 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 CPLX4Q7Z7G2 160 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GALNT7Q86SF2 657 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 CAMK1DQ8IU85 385 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 DENND6AQ8IWF6 608 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PCDH20Q8N6Y1 951 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 NAT16Q8N8M0 369 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 MDGA1Q8NFP4 955 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 OR6P1Q8NGX9 317 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms