RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 GDF10P55107 478 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 EIF3EP60228 445 aaKnown RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PPIDQ08752 370 aaKnown RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 SLC10A7Q0GE19 358 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 CNTN1Q12860 1018 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PDK1Q15118 436 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 RASA2Q15283 850 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 RALGPS1Q5JS13 557 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 ATXN7L2Q5T6C5 722 aaPredicted RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 C6orf89Q6UWU4 347 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 MICALCLQ6ZW33 695 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 CENPUQ71F23 418 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 ASCL5Q7RTU5 278 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 YTHDF3Q7Z739 585 aaKnown RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 FAM124AQ86V42 546 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PPIL6Q8IXY8 311 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 CCDC13Q8IYE1 715 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 TMEFF1Q8IYR6 380 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 TEX26Q8N6G2 289 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 NAT8LQ8N9F0 302 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 HCAR2Q8TDS4 363 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 CPT1BQ92523 772 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 MAML1Q92585 1016 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 RTP4Q96DX8 246 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 C9orf72Q96LT7 481 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 OLFM3Q96PB7 478 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PHF12Q96QT6 1004 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 TUBGCP5Q96RT8 1024 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 SELENOSQ9BQE4 189 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 HDAC8Q9BY41 377 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 PPCSQ9HAB8 311 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 SAYSD1Q9NPB0 183 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 HAUS2Q9NVX0 235 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 SERGEFQ9UGK8 458 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 EVLQ9UI08 416 aaPredicted RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 HEY1Q9Y5J3 304 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 FAM169AQ9Y6X4 670 aa8.9□□□□□ -0.99
SMAD4-217ENST00000611848 TNRC6BQ9UPQ9 1833 aaKnown RBP8.9□□□□□ -0.99
SMAD4-217ENST00000611848 METTL12A8MUP2 240 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 E7ESA3 106 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 PLRG1O43660 514 aaKnown RBP8.89□□□□□ -0.99
SMAD4-217ENST00000611848 GFRA3O60609 400 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 IFNB1P01574 187 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 UGT2B4P06133 528 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 RBP3P10745 1247 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 CES1P23141 567 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 GCAP28676 217 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 NEK3P51956 506 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 AP1S1P61966 158 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 POM121L1PQ3SYA9 428 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 ZNF805Q5CZA5 627 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 WDR45BQ5MNZ6 344 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 SYCP2LQ5T4T6 812 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 AGBL4Q5VU57 503 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 LYSMD4Q5XG99 296 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 GDPD4Q6W3E5 623 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 ERN2Q76MJ5 926 aaKnown RBP8.89□□□□□ -0.99
SMAD4-217ENST00000611848 SLC41A1Q8IVJ1 513 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 FAM71DQ8N9W8 422 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 CCNYQ8ND76 341 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 OR2T34Q8NGX1 318 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 OR6K2Q8NGY2 324 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 OR14C36Q8NHC7 312 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 P3H4Q92791 437 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 ARRDC3Q96B67 414 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 CHMP6Q96FZ7 201 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 EXOC2Q96KP1 924 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 ZNF641Q96N77 438 aaPredicted RBP8.89□□□□□ -0.99
SMAD4-217ENST00000611848 MGME1Q9BQP7 344 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 SUV39H2Q9H5I1 410 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 INTS9Q9NV88 658 aaKnown RBP8.89□□□□□ -0.99
SMAD4-217ENST00000611848 NCDNQ9UBB6 729 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 DKK3Q9UBP4 350 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 CTNNAL1Q9UBT7 734 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 FETUBQ9UGM5 382 aa8.89□□□□□ -0.99
SMAD4-217ENST00000611848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.88□□□□□ -0.99
SMAD4-217ENST00000611848 BCLAF3A2AJT9 711 aaKnown RBP8.88□□□□□ -0.99
SMAD4-217ENST00000611848 C16orf96A6NNT2 1141 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 MUSKO15146 869 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 NEBLO76041 1014 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 CCNB1P14635 433 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 TSHRP16473 764 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 GKP32189 559 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 HOXD12P35452 270 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 PTGER3P43115 390 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 RGRP47804 291 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 SCNN1BP51168 640 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 METAP1P53582 386 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 ADPRHP54922 357 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 ARL4CP56559 192 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 CREB5Q02930 508 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 AP1B1Q10567 949 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 FASTKD3Q14CZ7 662 aaKnown RBP8.88□□□□□ -0.99
SMAD4-217ENST00000611848 HIF1AQ16665 826 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 QPCTQ16769 361 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 CCDC38Q502W7 563 aa8.88□□□□□ -0.99
SMAD4-217ENST00000611848 PIP5KL1Q5T9C9 394 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms