RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 TTC24A2A3L6 582 aaPredicted RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 GLTPD2A6NH11 291 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 H7C4K7 107 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 TBC1D4O60343 1298 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 FAM163BP0C2L3 166 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 SLC2A4P14672 509 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 HTR7P34969 479 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 ALDH7A1P49419 539 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 MTTPP55157 894 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 OCA2Q04671 838 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 VPS26BQ4G0F5 336 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 PITRM1Q5JRX3 1037 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 REP15Q6BDI9 236 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 GRAMD4Q6IC98 578 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 PAOXQ6QHF9 649 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 C16orf59Q7L2K0 433 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 PDSS2Q86YH6 399 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 GALNT15Q8N3T1 639 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 DHRSXQ8N5I4 330 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 CDYL2Q8N8U2 506 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 STYXQ8WUJ0 223 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 SNX19Q92543 992 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 DNAJC1Q96KC8 554 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 BTN2A3PQ96KV6 586 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 C1orf50Q9BV19 199 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 MRPS26Q9BYN8 205 aaKnown RBP8.71□□□□□ -1.02
LIG4-204ENST00000611712 POLG2Q9UHN1 485 aa8.71□□□□□ -1.02
LIG4-204ENST00000611712 ZCWPW2A0A1B0GU75 182 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 C16orf96A6NNT2 1141 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 TLR5O60602 858 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 DUSP11O75319 330 aaKnown RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 VPS4BO75351 444 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ATP6V1B2P21281 511 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 AKT1P31749 480 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 SLC10A7Q0GE19 358 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ILF2Q12905 390 aaKnown RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 ZBTB6Q15916 424 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 FAM91A1Q658Y4 838 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 FAM117BQ6P1L5 589 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 CYP4V2Q6ZWL3 525 aaPredicted RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 NKAPQ8N5F7 415 aaKnown RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 MAPK15Q8TD08 544 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 LRTOMTQ8WZ04 291 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 OSBPL11Q9BXB4 747 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ASPSCR1Q9BZE9 553 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 RRAGCQ9HB90 399 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ZMYM5Q9UJ78 669 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 RAB26Q9ULW5 256 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ZNF711Q9Y462 761 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 PTGESO14684 152 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 SLC7A4O43246 635 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 HOXD10P28358 340 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ATP5C1P36542 298 aaKnown RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 CCNIQ14094 377 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 IL27RAQ6UWB1 636 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 TNIP2Q8NFZ5 429 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 MAGEE2Q8TD90 523 aaPredicted RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 SORT1Q99523 831 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 RHBDL2Q9NX52 303 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ADAMTS6Q9UKP5 1117 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 TIMM22Q9Y584 194 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 A8MT66 165 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 SLC22A2O15244 555 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 SORBS2O94875 1100 aaKnown RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 MBL2P11226 248 aaPredicted RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 CNPY1Q3B7I2 92 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 CACHD1Q5VU97 1274 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ARHGAP22Q7Z5H3 698 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 STK32CQ86UX6 486 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 FAM47BQ8NA70 645 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 OR4K2Q8NGD2 314 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 NAT14Q8WUY8 206 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 TWIST2Q8WVJ9 160 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 TCF12Q99081 682 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 BDH2Q9BUT1 245 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ZBTB26Q9HCK0 441 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 ANAPC2Q9UJX6 822 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 LSM7Q9UK45 103 aaKnown RBP8.7□□□□□ -1.02
LIG4-204ENST00000611712 BLOC1S6Q9UL45 172 aa8.7□□□□□ -1.02
LIG4-204ENST00000611712 A0A087WXM4 84 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 A6NHS1 94 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 MYO1GB0I1T2 1018 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 C9IYK1 514 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 J3KR12 359 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 UBXN8O00124 270 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 TBX18O95935 607 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SLC35E2BP0CK96 405 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 ITGALP20701 1170 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 PAX3P23760 479 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 GJA9P57773 515 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 MCCD1P59942 119 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 FKBP1BP68106 108 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SREBF2Q12772 1141 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 RNF219Q5W0B1 726 aaPredicted RBP8.69□□□□□ -1.02
LIG4-204ENST00000611712 MAMDC4Q6UXC1 1216 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 SPPL2CQ8IUH8 684 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 DCBLD1Q8N8Z6 715 aa8.69□□□□□ -1.02
LIG4-204ENST00000611712 TXNDC5Q8NBS9 432 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms