RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 URODP06132 367 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 MBL2P11226 248 aaPredicted RBP28.11■■■□□ 2.09
CSPG5-205ENST00000610462 ELF1P32519 619 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 ZNF549Q6P9A3 640 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 ACAD11Q709F0 780 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 KDM1BQ8NB78 822 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 CCDC28BQ9BUN5 200 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 TDRD1Q9BXT4 1180 aaKnown RBP28.11■■■□□ 2.09
CSPG5-205ENST00000610462 NUF2Q9BZD4 464 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 RC3H2Q9HBD1 1191 aaKnown RBP28.11■■■□□ 2.09
CSPG5-205ENST00000610462 TMEM39AQ9NV64 488 aa28.11■■■□□ 2.09
CSPG5-205ENST00000610462 OBSL1O75147 1896 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 A8MT66 165 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 F8W8V4 182 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 NEMP1O14524 444 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 CIB2O75838 187 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 IPO13O94829 963 aaKnown RBP28.1■■■□□ 2.09
CSPG5-205ENST00000610462 ZNF140P52738 457 aaPredicted RBP28.1■■■□□ 2.09
CSPG5-205ENST00000610462 SLC25A3Q00325 362 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 LSM12Q3MHD2 195 aaKnown RBP28.1■■■□□ 2.09
CSPG5-205ENST00000610462 FAM117BQ6P1L5 589 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 ZNF783Q6ZMS7 281 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 TMCO2Q7Z6W1 182 aaPredicted RBP28.1■■■□□ 2.09
CSPG5-205ENST00000610462 SDCCAG8Q86SQ7 713 aaPredicted RBP28.1■■■□□ 2.09
CSPG5-205ENST00000610462 TMEM150AQ86TG1 271 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 RMDN1Q96DB5 314 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 CLPTM1LQ96KA5 538 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 SPG21Q9NZD8 308 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 ATP11BQ9Y2G3 1177 aa28.1■■■□□ 2.09
CSPG5-205ENST00000610462 ABHD14A-ACY1A0A1B0GW23 586 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 PSMG1O95456 288 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 LATS1O95835 1130 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 F11P03951 625 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 COX4I1P13073 169 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 KCNA5P22460 613 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 EPHB3P54753 998 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 GPR158Q5T848 1215 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 DDX53Q86TM3 631 aaKnown RBP28.09■■■□□ 2.09
CSPG5-205ENST00000610462 TCEAL8Q8IYN2 117 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 KCNV2Q8TDN2 545 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 ZFRQ96KR1 1074 aaKnown RBP28.09■■■□□ 2.09
CSPG5-205ENST00000610462 SMPD4Q9NXE4 827 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 CDYLQ9Y232 598 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 PRLP01236 227 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 LAG3P18627 525 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 EPHA3P29320 983 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 ARF5P84085 180 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 TAF1AQ15573 450 aaPredicted RBP28.09■■■□□ 2.09
CSPG5-205ENST00000610462 TYSND1Q2T9J0 566 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 C6orf163Q5TEZ5 329 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 GIMAP7Q8NHV1 300 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 OSBPL1AQ9BXW6 950 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 CRISPLD2Q9H0B8 497 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 SLC7A8Q9UHI5 535 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 INSL5Q9Y5Q6 135 aa28.09■■■□□ 2.09
CSPG5-205ENST00000610462 C1RP00736 705 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 SLC4A1P02730 911 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 STC1P52823 247 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 SMAD3P84022 425 aaKnown RBP28.08■■■□□ 2.09
CSPG5-205ENST00000610462 TRMT5Q32P41 509 aaKnown RBP28.08■■■□□ 2.09
CSPG5-205ENST00000610462 PIM3Q86V86 326 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 SLC22A9Q8IVM8 553 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 STMN2Q93045 179 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 PPP1R36Q96LQ0 422 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 POPDC3Q9HBV1 291 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 CYP4F12Q9HCS2 524 aa28.08■■■□□ 2.09
CSPG5-205ENST00000610462 A0A088AWK7 358 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 KRT36O76013 467 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 PSMA3P25788 255 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 SUOXP51687 545 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 DEFB103AP81534 67 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 RCN1Q15293 331 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 GLT6D1Q7Z4J2 308 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 SH3RF2Q8TEC5 729 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 AUTS2Q8WXX7 1259 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 INTS10Q9NVR2 710 aaKnown RBP28.07■■■□□ 2.08
CSPG5-205ENST00000610462 CD160O95971 181 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 TIAL1Q01085 375 aaKnown RBP eCLIP28.07■■■□□ 2.08
CSPG5-205ENST00000610462 SH2D4BQ5SQS7 431 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 ISCA2Q86U28 154 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.07■■■□□ 2.08
CSPG5-205ENST00000610462 CPSF7Q8N684 471 aaKnown RBP28.07■■■□□ 2.08
CSPG5-205ENST00000610462 MDGA1Q8NFP4 955 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 CYP2S1Q96SQ9 504 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 ZNF334Q9HCZ1 680 aaPredicted RBP28.07■■■□□ 2.08
CSPG5-205ENST00000610462 RAI2Q9Y5P3 530 aa28.07■■■□□ 2.08
CSPG5-205ENST00000610462 LOC100653049A0A140TA62 436 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 TBL1XO60907 577 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 KRT34O76011 436 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 PMLP29590 882 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 TLDC1Q6P9B6 456 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 CMTR2Q8IYT2 770 aaKnown RBP28.06■■■□□ 2.08
CSPG5-205ENST00000610462 ANKRD27Q96NW4 1050 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 AARSD1Q9BTE6 412 aaKnown RBP28.06■■■□□ 2.08
CSPG5-205ENST00000610462 ALG9Q9H6U8 611 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 EML4Q9HC35 981 aaKnown RBP28.06■■■□□ 2.08
CSPG5-205ENST00000610462 TRPC7Q9HCX4 862 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 SSX2IPQ9Y2D8 614 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 GBF1Q92538 1859 aa28.06■■■□□ 2.08
CSPG5-205ENST00000610462 TRPC5OSA6NMA1 111 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms