RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 FAM81AQ8TBF8 368 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 EPS8L1Q8TE68 723 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 GAD1Q99259 594 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 TPK1Q9H3S4 243 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 SUCOQ9UBS9 1254 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PDE2AO00408 941 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CLDN5O00501 218 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PRODHO43272 600 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 SERPINA1P01009 418 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 IDO1P14902 403 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CBX3Q13185 183 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PRR23CQ6ZRP0 262 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 EIF1ADQ8N9N8 165 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 GLIS3Q8NEA6 775 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 TTLL2Q9BWV7 592 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 POLR3HQ9Y535 204 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 NADKO95544 446 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 IL1R1P14778 569 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 SULT1C3Q6IMI6 304 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ATL1Q8WXF7 558 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 OTCP00480 354 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CYP1A2P05177 515 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CDK9P50750 372 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 TMEM86AQ8N2M4 240 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PFDN2Q9UHV9 154 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PAPSS1O43252 624 aaPredicted RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF613Q6PF04 617 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 YTHDF3Q7Z739 585 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 DSELQ8IZU8 1212 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 PNPT1Q8TCS8 783 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF398Q8TD17 642 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 EXOC2Q96KP1 924 aa13.11□□□□□ -0.31
USP6NL-205ENST00000609104 TDRD1Q9BXT4 1180 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 MRPL17Q9NRX2 175 aaKnown RBP13.11□□□□□ -0.31
USP6NL-205ENST00000609104 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ARHGEF33A8MVX0 844 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ERAL1O75616 437 aaKnown RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CLUP10909 449 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF143P52747 638 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 RGS1Q08116 209 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ZFP69Q49AA0 526 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 GSTCDQ8NEC7 633 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ACMSDQ8TDX5 336 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SNX15Q9NRS6 342 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SUV39H1O43463 412 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SLC22A3O75751 556 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 QPCTQ16769 361 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 MAP2K7O14733 419 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 PSEN2P49810 448 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CRTC3Q6UUV7 619 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 PPP1R13LQ8WUF5 828 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 HDAC10Q969S8 669 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CDH19Q9H159 772 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 A8MUI8 341 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SERPINB7O75635 380 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 HOXB8P17481 243 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 EPHX2P34913 555 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 FCRL4Q96PJ5 515 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 NDUFS2O75306 463 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF432O94892 652 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 MPPE1Q53F39 396 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 A0A0J9YYE9 177 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SEPHS1P49903 392 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF135P52742 658 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 NETO2Q8NC67 525 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 PRPF19Q9UMS4 504 aaKnown RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CD163L1Q9NR16 1453 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 FAUP35544 74 aaKnown RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CBX5P45973 191 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 TXNDC11Q6PKC3 985 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 GALNTL5Q7Z4T8 443 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 MNTQ99583 582 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ADAM2Q99965 735 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SEMA3CQ99985 751 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 TCRBV5S4A2TA0A5A2 114 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CYP4F8P98187 520 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 NRG1Q02297 640 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 GPR180Q86V85 440 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 ART4Q93070 314 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 CXorf40BQ96DE9 158 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 HDAC3O15379 428 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 LYPLA1O75608 230 aaPredicted RBP13.1□□□□□ -0.31
USP6NL-205ENST00000609104 SLC7A2P52569 658 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 PMM1Q92871 262 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 BORCS5Q969J3 196 aa13.1□□□□□ -0.31
USP6NL-205ENST00000609104 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms