RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 CCNB1P14635 433 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 TSHRP16473 764 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 ETV3P41162 512 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 NOP2P46087 812 aaKnown RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 POLR2LP62875 67 aaKnown RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 PPARDQ03181 441 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 PPIDQ08752 370 aaKnown RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 MTM1Q13496 603 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 TCEAL1Q15170 157 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 CDKN3Q16667 212 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 ARMC12Q5T9G4 340 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 ALG1LQ6GMV1 187 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 CRTC1Q6UUV9 634 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 RAD9BQ6WBX8 426 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 HID1Q8IV36 788 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 RHOT1Q8IXI2 618 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 GALNT15Q8N3T1 639 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 CNTD1Q8N815 330 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 OR1E3Q8WZA6 343 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 NUS1Q96E22 293 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 TDRD1Q9BXT4 1180 aaKnown RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 FGF22Q9HCT0 170 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 SAE1Q9UBE0 346 aaPredicted RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 SPASTQ9UBP0 616 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 CD84Q9UIB8 345 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
CTSA-210ENST00000606000 ASPMQ8IZT6 3477 aa12.32□□□□□ -0.44
CTSA-210ENST00000606000 ARID1BQ8NFD5 2236 aaPredicted RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 CFAP69A5D8W1 941 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 TRABD2BA6NFA1 517 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 NEMP2A6NFY4 417 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 PRLP01236 227 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 JCHAINP01591 159 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 MMP2P08253 660 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 C1SP09871 688 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 ALPPL2P10696 532 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 CKMT1AP12532 417 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 PECAM1P16284 738 aaPredicted RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 HNF1BP35680 557 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 SLC1A1P43005 524 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 HK3P52790 923 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 SRP54P61011 504 aaKnown RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 ADCY2Q08462 1091 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 AP1B1Q10567 949 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 TARDBPQ13148 414 aaKnown RBP eCLIP12.31□□□□□ -0.44
CTSA-210ENST00000606000 HS1BP3Q53T59 392 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 RALGPS1Q5JS13 557 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 LRRC38Q5VT99 294 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 KAZNQ674X7 775 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 LRRC66Q68CR7 880 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 ZCCHC8Q6NZY4 707 aaKnown RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 GUSBP11Q6P575 273 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 TMPRSS12Q86WS5 348 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 LRRC49Q8IUZ0 686 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 ACRBPQ8NEB7 543 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 LPCAT1Q8NF37 534 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 PTCD2Q8WV60 388 aaKnown RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 WDR92Q96MX6 357 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 OLFM3Q96PB7 478 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 MCCC1Q96RQ3 725 aaPredicted RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 SLC13A1Q9BZW2 595 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 BRD8Q9H0E9 1235 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 SUDS3Q9H7L9 328 aaPredicted RBP12.31□□□□□ -0.44
CTSA-210ENST00000606000 KLQ9UEF7 1012 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 PHTF1Q9UMS5 762 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 CSNK1G3Q9Y6M4 447 aa12.31□□□□□ -0.44
CTSA-210ENST00000606000 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 CPED1A4D0V7 1026 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 GOLGA6CA6NDK9 693 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 GOLGA6BA6NDN3 693 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 TMEM8BA6NDV4 472 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 ZNF487B1APH4 448 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 TOR1BO14657 336 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 YY2O15391 372 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 RASGRP1O95267 797 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 NDUFA10O95299 355 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 GOLGA6DP0CG33 693 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 CYP2A6P11509 494 aaPredicted RBP12.3□□□□□ -0.44
CTSA-210ENST00000606000 JUPP14923 745 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 MX2P20592 715 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 FECHP22830 423 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 CD86P42081 329 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 CDKN2BP42772 138 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 PEX5P50542 639 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 HADHBP55084 474 aaKnown RBP12.3□□□□□ -0.44
CTSA-210ENST00000606000 KIAA1024LP59773 190 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SKOR1P84550 965 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 PERM1Q5SV97 790 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 ESRP1Q6NXG1 681 aaKnown RBP12.3□□□□□ -0.44
CTSA-210ENST00000606000 PNCKQ6P2M8 343 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SPOCD1Q6ZMY3 1216 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms