RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF527Q8NB42 609 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 E2F7Q96AV8 911 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 PGAP3Q96FM1 320 aaPredicted RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 VPS39Q96JC1 886 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CLPTM1LQ96KA5 538 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 KLHL15Q96M94 604 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 QKIQ96PU8 341 aaKnown RBP eCLIP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 PAPOLGQ9BWT3 736 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CELF4Q9BZC1 486 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 SHARPINQ9H0F6 387 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ABCG8Q9H221 673 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 CDC42EP4Q9H3Q1 356 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 COG4Q9H9E3 785 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 MRPS30Q9NP92 439 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 PLSCR3Q9NRY6 295 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ABCD2Q9UBJ2 740 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 MTRRQ9UBK8 725 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 SERPINB13Q9UIV8 391 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ZNF112Q9UJU3 913 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 AMFRQ9UKV5 643 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 ITGA11Q9UKX5 1188 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 SRPRBQ9Y5M8 271 aaKnown RBP8.9□□□□□ -0.98
COMMD3-215ENST00000602574 FPGT-TNNI3KV9GXZ4 949 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 XDHP47989 1333 aa8.9□□□□□ -0.98
COMMD3-215ENST00000602574 A0A0A6YYK5 440 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PRSS51A0A1B0GVH4 220 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 A8MUA0 341 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 SNAP23O00161 211 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 EYA2O00167 538 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CYP11A1P05108 521 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 S100A8P05109 93 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CYP2A6P11509 494 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF26P17031 533 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CBLP22681 906 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PTGIRP43119 386 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CDH4P55283 916 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 EIF6P56537 245 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 HNRNPKP61978 463 aaKnown RBP eCLIP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CLCQ05315 142 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RGS1Q08116 209 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 STX5Q13190 355 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TMEM44Q2T9K0 475 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 KLHL12Q53G59 568 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 FAM160B1Q5W0V3 765 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 VPS37DQ86XT2 251 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 HIPK1Q86Z02 1210 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 NPAS4Q8IUM7 802 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PHC2Q8IXK0 858 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TCTE3Q8IZS6 198 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 OXR1Q8N573 874 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 OR6Q1Q8NGQ2 317 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PLBD2Q8NHP8 589 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RNF139Q8WU17 664 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 DNAJA4Q8WW22 397 aaPredicted RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 BSNDQ8WZ55 320 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TUBGCP3Q96CW5 907 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 DUS3LQ96G46 650 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 C9orf72Q96LT7 481 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CCDC17Q96LX7 622 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ZNF285Q96NJ3 590 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RSAD1Q9HA92 442 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 EPHA6Q9UF33 1036 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 NR2E1Q9Y466 385 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 COPG1Q9Y678 874 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TAF1LQ8IZX4 1826 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 MYH3P11055 1940 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 UBR1Q8IWV7 1749 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 NWD2Q9ULI1 1742 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 FAM221BA6H8Z2 402 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 EML1O00423 815 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 SYN3O14994 580 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PIP5K1CO60331 668 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RPS6KA4O75676 772 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 FAM13AO94988 1023 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 DLGAP3O95886 979 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ASGR1P07306 291 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PFKMP08237 780 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 FBP1P09467 338 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ITGA4P13612 1032 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 FGFR2P21802 821 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 KLRC1P26715 233 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CALML3P27482 149 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 TIE1P35590 1138 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 IL12RB1P42701 662 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RPS5P46782 204 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PGDP52209 483 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CAPZA1P52907 286 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 EIF3EP60228 445 aaKnown RBP8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ACTR2P61160 394 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PPIL2Q13356 520 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 FAM47AQ5JRC9 791 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CDKL4Q5MAI5 379 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 IRAK1BP1Q5VVH5 260 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 DESI1Q6ICB0 168 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 PKN3Q6P5Z2 889 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 ANKS3Q6ZW76 656 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RRM2BQ7LG56 351 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 CHSY1Q86X52 802 aa8.89□□□□□ -0.99
COMMD3-215ENST00000602574 RNF113BQ8IZP6 322 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms