RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PIH1D2Q8WWB5 315 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 BAG1Q99933 345 aaPredicted RBP17.24■□□□□ 0.35
HERC3-214ENST00000601319 DUSP23Q9BVJ7 150 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 GOLPH3Q9H4A6 298 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 KLF15Q9UIH9 416 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 SALL4Q9UJQ4 1053 aa17.24■□□□□ 0.35
HERC3-214ENST00000601319 RPL26L1Q9UNX3 145 aaKnown RBP17.24■□□□□ 0.35
HERC3-214ENST00000601319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.24■□□□□ 0.35
HERC3-214ENST00000601319 DMXL2Q8TDJ6 3036 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 COL27A1Q8IZC6 1860 aaPredicted RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 TMEM8BA6NDV4 472 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 RCCD1A6NED2 376 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 NPIPB15A6NHN6 443 aaPredicted RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 KCNK1O00180 336 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 PJA2O43164 708 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 AQP9O43315 295 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 SIGLEC6O43699 453 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 NEBLO76041 1014 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 HOXC4P09017 264 aaPredicted RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 JUNDP17535 347 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 LHCGRP22888 699 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 HTR1BP28222 390 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 VAV2P52735 878 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 KIAA1024LP59773 190 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 ITKQ08881 620 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 IHHQ14623 411 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 INPP5AQ14642 412 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 SMAD1Q15797 465 aaKnown RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 ZNF542PQ5EBM4 170 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 SPOCD1Q6ZMY3 1216 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 BZW1Q7L1Q6 419 aaKnown RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 DAAM2Q86T65 1068 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 PHACTR4Q8IZ21 702 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 NDUFAF2Q8N183 169 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 CBARPQ8N350 705 aaPredicted RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 FAM181AQ8N9Y4 354 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 ATL2Q8NHH9 583 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 USP29Q9HBJ7 922 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 APOBEC3BQ9UH17 382 aaKnown RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 DNPEPQ9ULA0 475 aa17.23■□□□□ 0.35
HERC3-214ENST00000601319 PNMA8BQ9ULN7 279 aaPredicted RBP17.23■□□□□ 0.35
HERC3-214ENST00000601319 CAPN8A6NHC0 703 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 GOLGA8CPA6NN73 597 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 TPP1O14773 563 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 FFAR2O15552 330 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 PCCBP05166 539 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 PDHA1P08559 390 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 TNNT1P13805 278 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 TGM2P21980 687 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 TRIM23P36406 574 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 MARCKSL1P49006 195 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 BLKP51451 505 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 NIPAL4Q0D2K0 466 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 ZBTB17Q13105 803 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 DNAJC3Q13217 504 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 ACOX1Q15067 660 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 PRKD1Q15139 912 aaPredicted RBP17.22■□□□□ 0.35
HERC3-214ENST00000601319 SLC14A2Q15849 920 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 PPP2R5EQ16537 467 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 ZCCHC8Q6NZY4 707 aaKnown RBP17.22■□□□□ 0.35
HERC3-214ENST00000601319 RCOR2Q8IZ40 523 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 CNTD1Q8N815 330 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 NUS1Q96E22 293 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 DTD2Q96FN9 168 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 APOOQ9BUR5 198 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 LRRC61Q9BV99 259 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 SPASTQ9UBP0 616 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 TTLL3Q9Y4R7 772 aa17.22■□□□□ 0.35
HERC3-214ENST00000601319 ANKRD11Q6UB99 2663 aaPredicted RBP17.22■□□□□ 0.35
HERC3-214ENST00000601319 ZFC3H1O60293 1989 aaKnown RBP17.21■□□□□ 0.35
HERC3-214ENST00000601319 hCG_1818297A0A087WSY0 165 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 A0A0J9YYE9 177 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 K7ESM1 405 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 ZRANB2O95218 330 aaKnown RBP eCLIP17.21■□□□□ 0.35
HERC3-214ENST00000601319 JCHAINP01591 159 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 TRBC1P01850 177 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 PROS1P07225 676 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 MMP2P08253 660 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 CKMT1AP12532 417 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 ZNF30P17039 623 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 TEAD1P28347 426 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 CTNNA1P35221 906 aaKnown RBP17.21■□□□□ 0.35
HERC3-214ENST00000601319 DYNLT1P63172 113 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 PPARDQ03181 441 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 AP1B1Q10567 949 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 NPNTQ6UXI9 565 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 CCNI2Q6ZMN8 369 aaPredicted RBP17.21■□□□□ 0.35
HERC3-214ENST00000601319 RAVER1Q8IY67 606 aaKnown RBP17.21■□□□□ 0.35
HERC3-214ENST00000601319 RBFAQ8N0V3 343 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 TXLNBQ8N3L3 684 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 PLA2G15Q8NCC3 412 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 LRRN4Q8WUT4 740 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 WDR92Q96MX6 357 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 LYSMD1Q96S90 227 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 SLC13A1Q9BZW2 595 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 CAAP1Q9H8G2 361 aa17.21■□□□□ 0.35
HERC3-214ENST00000601319 EVA1BQ9NVM1 165 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms