RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TRIM14Q14142 442 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 PDK2Q15119 407 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 SLC18A3Q16572 532 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 PNCKQ6P2M8 343 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 IGF2-ASQ6U949 168 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 RBM44Q6ZP01 1051 aaKnown RBP15.85■□□□□ 0.13
VRK3-221ENST00000600284 H2AFVQ71UI9 128 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 MAP7D3Q8IWC1 876 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 TEX26Q8N6G2 289 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 OR6C4Q8NGE1 309 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 OR56A4Q8NGH8 313 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 FATE1Q969F0 183 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 FUBP1Q96AE4 644 aaKnown RBP15.85■□□□□ 0.13
VRK3-221ENST00000600284 SCRN2Q96FV2 425 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 COQ10AQ96MF6 247 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 RBM15Q96T37 977 aaKnown RBP eCLIP15.85■□□□□ 0.13
VRK3-221ENST00000600284 XPO4Q9C0E2 1151 aaKnown RBP15.85■□□□□ 0.13
VRK3-221ENST00000600284 POLR1BQ9H9Y6 1135 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 B4GALT6Q9UBX8 382 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 PPIL1Q9Y3C6 166 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 CELSR3Q9NYQ7 3312 aa15.85■□□□□ 0.13
VRK3-221ENST00000600284 LRRK1Q38SD2 2015 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 ZFYVE26Q68DK2 2539 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 SSU72P8A0A1W2PR75 194 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 TTC24A2A3L6 582 aaPredicted RBP15.84■□□□□ 0.13
VRK3-221ENST00000600284 PSMD11O00231 422 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 PROSCO94903 275 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 KRT7P08729 469 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 VIPR1P32241 457 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 ERVPABLB-1P60509 514 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 DPYSL3Q14195 570 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 ACOX1Q15067 660 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 PAFAH1B3Q15102 231 aaKnown RBP15.84■□□□□ 0.13
VRK3-221ENST00000600284 PERM1Q5SV97 790 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 ARMC12Q5T9G4 340 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 SPECC1LQ69YQ0 1117 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 TIGD7Q6NT04 549 aaPredicted RBP15.84■□□□□ 0.13
VRK3-221ENST00000600284 RD3Q7Z3Z2 195 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 NDUFAF2Q8N183 169 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 KCTD6Q8NC69 237 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 OR8K1Q8NGG5 319 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 PDCD6IPQ8WUM4 868 aaKnown RBP15.84■□□□□ 0.13
VRK3-221ENST00000600284 CTNNBL1Q8WYA6 563 aaPredicted RBP15.84■□□□□ 0.13
VRK3-221ENST00000600284 DNAJC7Q99615 494 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 ZNF670Q9BS34 389 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 HAUS2Q9NVX0 235 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 AMACRQ9UHK6 382 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 GPR34Q9UPC5 381 aa15.84■□□□□ 0.13
VRK3-221ENST00000600284 CACNA1GO43497 2377 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 TMEM202A6NGA9 273 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 HEXIM1O94992 359 aaKnown RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 PGLSO95336 258 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 MPOP05164 745 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 CELA2BP08218 269 aaPredicted RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 CD48P09326 243 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 KRT10P13645 584 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 CCNCP24863 283 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 TEAD1P28347 426 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 GARSP41250 739 aaKnown RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 GABREP78334 506 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 GALNT2Q10471 571 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 TRAF2Q12933 501 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 MMRN1Q13201 1228 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 CNGA3Q16281 694 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 TSR1Q2NL82 804 aaKnown RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 ASTE1Q2TB18 679 aaPredicted RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 ANKRD20A8PQ5CZ79 823 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 PCDH19Q8TAB3 1148 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 MAML1Q92585 1016 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 NUS1Q96E22 293 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 TSGA13Q96PP4 275 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 MCCC1Q96RQ3 725 aaPredicted RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 CCDC3Q9BQI4 270 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 POLR1EQ9GZS1 481 aaKnown RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 WDR26Q9H7D7 661 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 ZNHIT6Q9NWK9 470 aaKnown RBP15.83■□□□□ 0.12
VRK3-221ENST00000600284 GULP1Q9UBP9 304 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 ASXL3Q9C0F0 2248 aa15.83■□□□□ 0.12
VRK3-221ENST00000600284 ANKRD36A6QL64 1941 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 A8MX80 341 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 NTN3O00634 580 aaPredicted RBP15.82■□□□□ 0.12
VRK3-221ENST00000600284 MATN3O15232 486 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 FZD6O60353 706 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 MAN1A1P33908 653 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 MAXP61244 160 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 IFI16Q16666 785 aaKnown RBP15.82■□□□□ 0.12
VRK3-221ENST00000600284 ATP13A4Q4VNC1 1196 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 NCBP2-AS2Q69YL0 99 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 ALG1LQ6GMV1 187 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 OGFOD3Q6PK18 319 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 USP45Q70EL2 814 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 ZNF248Q8NDW4 579 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 GPR156Q8NFN8 814 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 OR1E3Q8WZA6 343 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 FAF2Q96CS3 445 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 DTD2Q96FN9 168 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 PDXPQ96GD0 296 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 HIC2Q96JB3 615 aa15.82■□□□□ 0.12
VRK3-221ENST00000600284 TEX101Q9BY14 249 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms