RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TMEM164Q5U3C3 297 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 AFMIDQ63HM1 303 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 SPECC1LQ69YQ0 1117 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 SLITRK4Q8IW52 837 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 TSEN2Q8NCE0 465 aaKnown RBP17.25■□□□□ 0.35
SMG9-210ENST00000600097 EXTL1Q92935 676 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 CELF6Q96J87 481 aaKnown RBP17.25■□□□□ 0.35
SMG9-210ENST00000600097 TMEM168Q9H0V1 697 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 WDR26Q9H7D7 661 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 MRPL40Q9NQ50 206 aaKnown RBP17.25■□□□□ 0.35
SMG9-210ENST00000600097 STARD5Q9NSY2 213 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 UNC13CQ8NB66 2214 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 SPTA1P02549 2419 aa17.25■□□□□ 0.35
SMG9-210ENST00000600097 LRP4O75096 1905 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 ZW10O43264 779 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 RGRP47804 291 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 RFTN1Q14699 578 aaPredicted RBP17.24■□□□□ 0.35
SMG9-210ENST00000600097 CLPPQ16740 277 aaPredicted RBP17.24■□□□□ 0.35
SMG9-210ENST00000600097 MAP9Q49MG5 647 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 PPP1R15BQ5SWA1 713 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 PHF19Q5T6S3 580 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 DPPA4Q7L190 304 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 PIM3Q86V86 326 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 DTX1Q86Y01 620 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 NEK11Q8NG66 645 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 USP7Q93009 1102 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 PCMTD1Q96MG8 357 aaPredicted RBP17.24■□□□□ 0.35
SMG9-210ENST00000600097 AGPAT1Q99943 283 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 CINPQ9BW66 212 aaPredicted RBP17.24■□□□□ 0.35
SMG9-210ENST00000600097 SLC39A8Q9C0K1 460 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 CYP4F12Q9HCS2 524 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 KCTD5Q9NXV2 234 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 MOSPD1Q9UJG1 213 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 AP4E1Q9UPM8 1137 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 PCDHGA4Q9Y5G9 962 aa17.24■□□□□ 0.35
SMG9-210ENST00000600097 MAST4O15021 2626 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 PRSS38A1L453 326 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 EEF2KO00418 725 aaKnown RBP17.23■□□□□ 0.35
SMG9-210ENST00000600097 ARHGAP6O43182 974 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 CPNE6O95741 557 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 ETV5P41161 510 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 MAPK10P53779 464 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 AP1S1P61966 158 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 B4GALNT1Q00973 533 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 SRSF6Q13247 344 aaKnown RBP17.23■□□□□ 0.35
SMG9-210ENST00000600097 PNCKQ6P2M8 343 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 ATG14Q6ZNE5 492 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 ZFAND4Q86XD8 727 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 SP110Q9HB58 689 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 FOXJ2Q9P0K8 574 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 IL17BQ9UHF5 180 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 LRRK1Q38SD2 2015 aa17.23■□□□□ 0.35
SMG9-210ENST00000600097 C9orf172C9J069 976 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.22■□□□□ 0.35
SMG9-210ENST00000600097 TRAFD1O14545 582 aaPredicted RBP17.22■□□□□ 0.35
SMG9-210ENST00000600097 HGSO14964 777 aaPredicted RBP17.22■□□□□ 0.35
SMG9-210ENST00000600097 DAPK3O43293 454 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 CCDC172P0C7W6 258 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
SMG9-210ENST00000600097 CCNB1P14635 433 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 RENBPP51606 427 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 ILF3Q12906 894 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMG9-210ENST00000600097 ACOX1Q15067 660 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 PPP1R2P3Q6NXS1 205 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 TMPRSS9Q7Z410 1059 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 VASH2Q86V25 355 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 C17orf82Q86X59 251 aaPredicted RBP17.22■□□□□ 0.35
SMG9-210ENST00000600097 SFTPA2Q8IWL1 248 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 MCOLN2Q8IZK6 566 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 CCL4L1Q8NHW4 92 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 GPBAR1Q8TDU6 330 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 SPOCK2Q92563 424 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 PSKH2Q96QS6 385 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 LGR4Q9BXB1 951 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 GSDMCQ9BYG8 508 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 SEMA6CQ9H3T2 930 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 DHX35Q9H5Z1 703 aaKnown RBP17.22■□□□□ 0.35
SMG9-210ENST00000600097 LMBRD1Q9NUN5 540 aa17.22■□□□□ 0.35
SMG9-210ENST00000600097 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.21■□□□□ 0.35
SMG9-210ENST00000600097 A0A1W2PQ67 120 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 RHPN2P1A8MT19 583 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 AGRPO00253 132 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 TEX33O43247 280 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 FAM87AP0C7U9 286 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 GM2AP17900 193 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 ITGB6P18564 788 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 NFKBIAP25963 317 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 SCNN1BP51168 640 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 OGDHQ02218 1023 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 IL10RBQ08334 325 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 PEX6Q13608 980 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 C16orf72Q14CZ0 275 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 ACAD10Q6JQN1 1059 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 RFX8Q6ZV50 586 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 ZNF438Q7Z4V0 828 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 COQ10AQ96MF6 247 aa17.21■□□□□ 0.35
SMG9-210ENST00000600097 CARS2Q9HA77 564 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms