RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 TMEM233B4DJY2 109 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 E9PBE3 544 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 ZBTB14O43829 449 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 KLHL41O60662 606 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 CSKP41240 450 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 PPP3CCP48454 512 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 SLC14A2Q15849 920 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 TSNAXIP1Q2TAA8 658 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 ATXN7L2Q5T6C5 722 aaPredicted RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 APCDD1Q8J025 514 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 OR4L1Q8NH43 312 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 TMA16Q96EY4 203 aaKnown RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 ALG14Q96F25 216 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 MRPL57Q9BQC6 102 aaKnown RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 LRRC3Q9BY71 257 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 ILKAPQ9H0C8 392 aaPredicted RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 POMKQ9H5K3 350 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 STN1Q9H668 368 aaKnown RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 WBP1LQ9NX94 342 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 LHX3Q9UBR4 397 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 TAGLN3Q9UI15 199 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 RAP2CQ9Y3L5 183 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 CDH23Q9H251 3354 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 MEI4A8MW99 385 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 MATN2O00339 956 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 NEMP1O14524 444 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 GRID2O43424 1007 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 LTA4HP09960 611 aaKnown RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 TFEBP19484 476 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 AOC1P19801 751 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 NCF2P19878 526 aaPredicted RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 DNAJB1P25685 340 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 RFTN1Q14699 578 aaPredicted RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 EML3Q32P44 896 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 GLT6D1Q7Z4J2 308 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 GALNT7Q86SF2 657 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 TMC8Q8IU68 726 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 SHKBP1Q8TBC3 707 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 NUDCD1Q96RS6 583 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 SMG9Q9H0W8 520 aaKnown RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 TNFRSF12AQ9NP84 129 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 VPS51Q9UID3 782 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 VPS28Q9UK41 221 aa14.5□□□□□ -0.09
VRK3-217ENST00000599538 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.5□□□□□ -0.09
VRK3-217ENST00000599538 DENND4CQ5VZ89 1909 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 PEX11AO75192 247 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 H2AFYO75367 372 aaKnown RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 LUC7L3O95232 432 aaKnown RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 PRAMEF12O95522 483 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 HNRNPLP14866 589 aaKnown RBP eCLIP14.49□□□□□ -0.09
VRK3-217ENST00000599538 EPHA3P29320 983 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 ABL2P42684 1182 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 RPL14P50914 215 aaKnown RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 PEX6Q13608 980 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 FAM83EQ2M2I3 478 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 CFAP157Q5JU67 520 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 TRIM67Q6ZTA4 783 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 EFHBQ8N7U6 833 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 KLHL23Q8NBE8 558 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 GPR150Q8NGU9 434 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 OR6K2Q8NGY2 324 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 SREK1Q8WXA9 508 aaKnown RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 CLPTM1LQ96KA5 538 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 LBHD1Q9BQE6 289 aaPredicted RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 NUF2Q9BZD4 464 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 BPIFA1Q9NP55 256 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 CATSPERZQ9NTU4 200 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 NLE1Q9NVX2 485 aaPredicted RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 FNDC3AQ9Y2H6 1198 aaKnown RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 PRRC2BQ5JSZ5 2229 aaKnown RBP14.49□□□□□ -0.09
VRK3-217ENST00000599538 MYOFQ9NZM1 2061 aa14.49□□□□□ -0.09
VRK3-217ENST00000599538 A0A1W2PRU2 124 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 A8MT66 165 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 ZBBXA8MT70 800 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 KIAA0355O15063 1070 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 GPR39O43194 453 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 DCXO43602 365 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 CKMP06732 381 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 CTSAP10619 480 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 PFKPQ01813 784 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 BBS7Q8IWZ6 715 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 MAGEC3Q8TD91 643 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 SLC22A17Q8WUG5 538 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 WDR60Q8WVS4 1066 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 PEX13Q92968 403 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 PTERQ96BW5 349 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 PHF21BQ96EK2 531 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 DDX50Q9BQ39 737 aaKnown RBP14.48□□□□□ -0.09
VRK3-217ENST00000599538 TM6SF2Q9BZW4 377 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 ALG9Q9H6U8 611 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.48□□□□□ -0.09
VRK3-217ENST00000599538 PLA2G4CQ9UP65 541 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 ANKRD66B4E2M5 251 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 SMAD6O43541 496 aaKnown RBP14.48□□□□□ -0.09
VRK3-217ENST00000599538 ATP5BP06576 529 aaKnown RBP14.48□□□□□ -0.09
VRK3-217ENST00000599538 FDXRP22570 491 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 ATP5F1P24539 256 aaPredicted RBP14.48□□□□□ -0.09
VRK3-217ENST00000599538 STC1P52823 247 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 CDH18Q13634 790 aa14.48□□□□□ -0.09
VRK3-217ENST00000599538 AGAP9Q5VTM2 703 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms