RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 TMEM202A6NGA9 273 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 LZTS3O60299 673 aaPredicted RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 CPP00450 1065 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 TPM1P09493 284 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 ALPIP09923 528 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 ELFN1P0C7U0 828 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 TSHRP16473 764 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 COMTP21964 271 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 CCNCP24863 283 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 VIPR1P32241 457 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 TRIM23P36406 574 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 MARCKSL1P49006 195 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 PEX5P50542 639 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 THOP1P52888 689 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 ADCY2Q08462 1091 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 PPIDQ08752 370 aaKnown RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 ILKQ13418 452 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 MTM1Q13496 603 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 IFI16Q16666 785 aaKnown RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 LRRC38Q5VT99 294 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 MFSD7Q6UXD7 560 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 NPNTQ6UXI9 565 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 VSIG1Q86XK7 387 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 GALNT15Q8N3T1 639 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 PDCD6IPQ8WUM4 868 aaKnown RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 PTCD2Q8WV60 388 aaKnown RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 OR1E3Q8WZA6 343 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 TSACCQ96A04 125 aaPredicted RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 SCRN2Q96FV2 425 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 MRFAP1L1Q96HT8 127 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 IL12RB2Q99665 862 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 BOCQ9BWV1 1114 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 FGF22Q9HCT0 170 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 RBM22Q9NW64 420 aaKnown RBP eCLIP12.18□□□□□ -0.46
LIG1-217ENST00000599165 RAI2Q9Y5P3 530 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 ZFC3H1O60293 1989 aaKnown RBP12.18□□□□□ -0.46
LIG1-217ENST00000599165 SCN8AQ9UQD0 1980 aa12.18□□□□□ -0.46
LIG1-217ENST00000599165 FAM208BQ5VWN6 2430 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 KCNK1O00180 336 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 TPP1O14773 563 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 YY2O15391 372 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 SOD1P00441 154 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 FUCA1P04066 466 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 KRT1P04264 644 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 CCNB1P14635 433 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 CTPS1P17812 591 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 CDKN2BP42772 138 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 HK3P52790 923 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 KIAA1024LP59773 190 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 POLR2LP62875 67 aaKnown RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 TARDBPQ13148 414 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■■■■□ 25.2
LIG1-217ENST00000599165 PTK2BQ14289 1009 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 CDKN3Q16667 212 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 PRRT3Q5FWE3 981 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 CDCP2Q5VXM1 449 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 ESRP1Q6NXG1 681 aaKnown RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 GUSBP11Q6P575 273 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 B4GALNT4Q76KP1 1039 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 TECPR1Q7Z6L1 1165 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 MAP7D3Q8IWC1 876 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 SFTPA2Q8IWL1 248 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 SLC35F3Q8IY50 421 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 DCBLD1Q8N8Z6 715 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 DTD2Q96FN9 168 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 TDRD1Q9BXT4 1180 aaKnown RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 POLR1EQ9GZS1 481 aaKnown RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 MRPL40Q9NQ50 206 aaKnown RBP12.17□□□□□ -0.46
LIG1-217ENST00000599165 SPASTQ9UBP0 616 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 DKK4Q9UBT3 224 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 PHTF1Q9UMS5 762 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 PCDHA13Q9Y5I0 950 aa12.17□□□□□ -0.46
LIG1-217ENST00000599165 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 A0A0J9YYE9 177 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 A0A1W2PQ67 120 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 NEMP2A6NFY4 417 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 SOWAHDA6NJG2 315 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 LMO7DNF2Z398 122 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 H3BM21 787 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 TRBC1P01850 177 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 PECAM1P16284 738 aaPredicted RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 HNF1BP35680 557 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 ETV3P41162 512 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 SLC1A1P43005 524 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 MAGEA1P43355 309 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 NOP2P46087 812 aaKnown RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 SRP54P61011 504 aaKnown RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 IFI35P80217 286 aaPredicted RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 SKOR1P84550 965 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 DAB2P98082 770 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 PPARDQ03181 441 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 ACOX1Q15067 660 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 TCEA2Q15560 299 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 ARMC12Q5T9G4 340 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms