RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 RPIAP49247 311 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 TBX2Q13207 712 aaPredicted RBP15.11■□□□□ 0.01
LIG1-215ENST00000597901 PTPRRQ15256 657 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 ELOCQ15369 112 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 NR0B2Q15466 257 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 C6orf132Q5T0Z8 1188 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 ZFYVE27Q5T4F4 411 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 ARMC12Q5T9G4 340 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 GUSBP11Q6P575 273 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 LVRNQ6Q4G3 990 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 C19orf48Q6RUI8 117 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 EFL1Q7Z2Z2 1120 aaKnown RBP15.11■□□□□ 0.01
LIG1-215ENST00000597901 MAPK15Q8TD08 544 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 LRRN4Q8WUT4 740 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 PIH1D2Q8WWB5 315 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 SCG3Q8WXD2 468 aaKnown RBP15.11■□□□□ 0.01
LIG1-215ENST00000597901 GLMNQ92990 594 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 FATE1Q969F0 183 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 RNF157Q96PX1 679 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 RBM22Q9NW64 420 aaKnown RBP eCLIP15.11■□□□□ 0.01
LIG1-215ENST00000597901 KLQ9UEF7 1012 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 PPIL1Q9Y3C6 166 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 GPSM3Q9Y4H4 160 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 RAI2Q9Y5P3 530 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 ASPMQ8IZT6 3477 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 ZFHX4Q86UP3 3567 aa15.11■□□□□ 0.01
LIG1-215ENST00000597901 AKR1B15C9JRZ8 316 aaPredicted RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 CACNB4O00305 520 aaPredicted RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 MTA2O94776 668 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 HEXIM1O94992 359 aaKnown RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 PDHA1P08559 390 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 ALPIP09923 528 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 CYP2A6P11509 494 aaPredicted RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 NFKBIAP25963 317 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 GBE1Q04446 702 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 IHHQ14623 411 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 CNGA3Q16281 694 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 DENND2CQ68D51 928 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 KCTD16Q68DU8 428 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 TIGD7Q6NT04 549 aaPredicted RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 ESRP1Q6NXG1 681 aaKnown RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 HSD11B1LQ7Z5J1 315 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 SLC35F3Q8IY50 421 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 PELI3Q8N2H9 469 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 SDR16C5Q8N3Y7 309 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 HNRNPLLQ8WVV9 542 aaKnown RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 NXPE2Q96DL1 559 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 LGR4Q9BXB1 951 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 POLR1EQ9GZS1 481 aaKnown RBP15.1■□□□□ 0.01
LIG1-215ENST00000597901 KCTD5Q9NXV2 234 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 GULP1Q9UBP9 304 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 PADI4Q9UM07 663 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 DOLKQ9UPQ8 538 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 DGKBQ9Y6T7 804 aa15.1■□□□□ 0.01
LIG1-215ENST00000597901 PDE2AO00408 941 aaPredicted RBP15.09■□□□□ 0.01
LIG1-215ENST00000597901 TNFRSF10CO14798 259 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 FZD6O60353 706 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 CCNB1P14635 433 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 CTPS1P17812 591 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 MX2P20592 715 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 TGM2P21980 687 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 KELP23276 732 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 KIAA1024LP59773 190 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 TCEAL1Q15170 157 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 TCEA2Q15560 299 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 PERM1Q5SV97 790 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 GKN2Q86XP6 184 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 CNGA4Q8IV77 575 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 RHOT2Q8IXI1 618 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 NDUFAF2Q8N183 169 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.09■□□□□ 0.01
LIG1-215ENST00000597901 CCNYQ8ND76 341 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 OR56A4Q8NGH8 313 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 TPCN2Q8NHX9 752 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 ARRDC2Q8TBH0 407 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 OR1E3Q8WZA6 343 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 DEPDC7Q96QD5 511 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 MCCC1Q96RQ3 725 aaPredicted RBP15.09■□□□□ 0.01
LIG1-215ENST00000597901 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.018e-6■□□□□ 8.4
LIG1-215ENST00000597901 MRPL40Q9NQ50 206 aaKnown RBP15.09■□□□□ 0.01
LIG1-215ENST00000597901 DTLQ9NZJ0 730 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 AMACRQ9UHK6 382 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 PCDHB1Q9Y5F3 818 aa15.09■□□□□ 0.01
LIG1-215ENST00000597901 KNTC1P50748 2209 aa15.08■□□□□ 0
LIG1-215ENST00000597901 GOLGA4Q13439 2230 aaKnown RBP15.08■□□□□ 0
LIG1-215ENST00000597901 TP53BP1Q12888 1972 aaPredicted RBP15.08■□□□□ 0
LIG1-215ENST00000597901 A0A0U1RQS6 177 aa15.08■□□□□ 0
LIG1-215ENST00000597901 NPIPB15A6NHN6 443 aaPredicted RBP15.08■□□□□ 0
LIG1-215ENST00000597901 PSMD11O00231 422 aa15.08■□□□□ 0
LIG1-215ENST00000597901 CSO75390 466 aaKnown RBP15.08■□□□□ 0
LIG1-215ENST00000597901 JCHAINP01591 159 aa15.08■□□□□ 0
LIG1-215ENST00000597901 LHCGRP22888 699 aa15.08■□□□□ 0
LIG1-215ENST00000597901 ETV3P41162 512 aa15.08■□□□□ 0
LIG1-215ENST00000597901 DSC2Q02487 901 aa15.08■□□□□ 0
LIG1-215ENST00000597901 NIPAL4Q0D2K0 466 aa15.08■□□□□ 0
LIG1-215ENST00000597901 ARHGEF7Q14155 803 aa15.08■□□□□ 0
LIG1-215ENST00000597901 ALG1LQ6GMV1 187 aa15.08■□□□□ 0
LIG1-215ENST00000597901 SARM1Q6SZW1 724 aa15.08■□□□□ 0
LIG1-215ENST00000597901 CRTC1Q6UUV9 634 aa15.08■□□□□ 0
LIG1-215ENST00000597901 Q6ZVL8 140 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms