RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 STARD8Q92502 1023 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 C18orf8Q96DM3 657 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 TBC1D31Q96DN5 1066 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 GSDMCQ9BYG8 508 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 PDCL3Q9H2J4 239 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 PLCB1Q9NQ66 1216 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 SPATS2LQ9NUQ6 558 aaKnown RBP10.17□□□□□ -0.78
TRIM28-210ENST00000597618 MOSPD1Q9UJG1 213 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 VPS4AQ9UN37 437 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 NEU3Q9UQ49 428 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 TP53TG5Q9Y2B4 290 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 KCTD3Q9Y597 815 aa10.17□□□□□ -0.78
TRIM28-210ENST00000597618 DOPEY1Q5JWR5 2465 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CHD5Q8TDI0 1954 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CELSR2Q9HCU4 2923 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 PRRC2CQ9Y520 2896 aaKnown RBP10.16□□□□□ -0.78
TRIM28-210ENST00000597618 EFCAB7A8K855 629 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 GOLGA8SH3BPF8 625 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 MKRN2OSH3BPM6 223 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 INSIG1O15503 277 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 RECQL5O94762 991 aaPredicted RBP10.16□□□□□ -0.78
TRIM28-210ENST00000597618 LRIG2O94898 1065 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ECEL1O95672 775 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 FGF1P05230 155 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 SLC9A1P19634 815 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CSF2RBP32927 897 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CDH5P33151 784 aaPredicted RBP10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ADRA1BP35368 520 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 TRIM23P36406 574 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 MLLT10P55197 1068 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ATP11AP98196 1134 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ABHD18Q0P651 414 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 RAPGEF1Q13905 1077 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ANKS6Q68DC2 871 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 TRNP1Q6NT89 227 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 GBP6Q6ZN66 633 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 MSANTD4Q8NCY6 345 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 SSC4DQ8WTU2 575 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 EXOC2Q96KP1 924 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ZNF641Q96N77 438 aaPredicted RBP10.16□□□□□ -0.78
TRIM28-210ENST00000597618 ZPBPQ9BS86 351 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 TRIT1Q9H3H1 467 aaKnown RBP10.16□□□□□ -0.78
TRIM28-210ENST00000597618 SUV39H2Q9H5I1 410 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CARS2Q9HA77 564 aaKnown RBP10.16□□□□□ -0.78
TRIM28-210ENST00000597618 PRDM8Q9NQV8 689 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 OCIAD1Q9NX40 245 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 TAAR2Q9P1P5 351 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 TMEM59LQ9UK28 342 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CTNND2Q9UQB3 1225 aa10.16□□□□□ -0.78
TRIM28-210ENST00000597618 CRYBG3Q68DQ2 2970 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 IGHV1OR21-1A0A087WYE8 117 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 LOC101059948A0A1B0GTJ6 334 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 FAM72CH0Y354 149 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 FGFR1OPO95684 399 aaKnown RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 LSM8O95777 96 aaKnown RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 ELFN1P0C7U0 828 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 MYCLP1P12525 358 aaPredicted RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 TCN2P20062 427 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 MPSTP25325 297 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 CLCN1P35523 988 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 NOP2P46087 812 aaKnown RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 UQCRFS1P47985 274 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 BPIFB4P59827 614 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 GPLD1P80108 840 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 APBA1Q02410 837 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 EXOC3L4Q17RC7 722 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 FAM72AQ5TYM5 149 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 NKAIN2Q5VXU1 208 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 ISM2Q6H9L7 571 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 CAPRIN2Q6IMN6 1127 aaKnown RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 FAM72DQ6L9T8 149 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 TCTN3Q6NUS6 607 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 TMEM71Q6P5X7 295 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 CEACAM20Q6UY09 585 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 KDELC2Q7Z4H8 507 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 HEATR4Q86WZ0 1026 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 FAM72BQ86X60 149 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 NRROSQ86YC3 692 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 UNC5BQ8IZJ1 945 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 EFCAB3Q8N7B9 438 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 RTL3Q8N8U3 475 aaKnown RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 BMPERQ8N8U9 685 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 NETO2Q8NC67 525 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 GALNT11Q8NCW6 608 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 RTP4Q96DX8 246 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 LGR4Q9BXB1 951 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 TRNAU1APQ9NX07 287 aaKnown RBP10.15□□□□□ -0.78
TRIM28-210ENST00000597618 LHX3Q9UBR4 397 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 MAN1B1Q9UKM7 699 aa10.15□□□□□ -0.78
TRIM28-210ENST00000597618 GTPBP10A4D1E9 387 aaKnown RBP10.14□□□□□ -0.79
TRIM28-210ENST00000597618 GOLGA6L4A6NEF3 574 aa10.14□□□□□ -0.79
TRIM28-210ENST00000597618 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
TRIM28-210ENST00000597618 PRKCGP05129 697 aa10.14□□□□□ -0.79
TRIM28-210ENST00000597618 PLEKP08567 350 aaPredicted RBP10.14□□□□□ -0.79
TRIM28-210ENST00000597618 BMP6P22004 513 aa10.14□□□□□ -0.79
TRIM28-210ENST00000597618 SERPINA4P29622 427 aa10.14□□□□□ -0.79
TRIM28-210ENST00000597618 YBEYP58557 167 aaPredicted RBP10.14□□□□□ -0.79
TRIM28-210ENST00000597618 MC2RQ01718 297 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms