RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SALL4Q9UJQ4 1053 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 RALYQ9UKM9 306 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 RPL26L1Q9UNX3 145 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 COQ6Q9Y2Z9 468 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 PCDHA13Q9Y5I0 950 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 ZFYVE26Q68DK2 2539 aa17.8■□□□□ 0.44
SHKBP1-204ENST00000594862 K7ESM1 405 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 PRKCGP05129 697 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 PCCBP05166 539 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 GP1BAP07359 652 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 HOXC4P09017 264 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 ALPIP09923 528 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 COMTP21964 271 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 FECHP22830 423 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 IFI35P80217 286 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 INPP5AQ14642 412 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 ELOCQ15369 112 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 ZNF542PQ5EBM4 170 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 FAXCQ5TGI0 409 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 ESRP1Q6NXG1 681 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 RAVER1Q8IY67 606 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 CACTIN-AS1Q8N1I8 211 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 TXLNBQ8N3L3 684 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 PLD5Q8N7P1 536 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 LMX1AQ8TE12 382 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 ZCCHC14Q8WYQ9 949 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 NUS1Q96E22 293 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 WDR92Q96MX6 357 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 APOOQ9BUR5 198 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 PPIL1Q9Y3C6 166 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 TTLL3Q9Y4R7 772 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 HEY1Q9Y5J3 304 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 RAI2Q9Y5P3 530 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 ATRXP46100 2492 aa17.79■□□□□ 0.44
SHKBP1-204ENST00000594862 C3orf70A6NLC5 250 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 LMO7DNF2Z398 122 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 NDUFA10O95299 355 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 TSHRP16473 764 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 ZNF30P17039 623 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 NR2C2P49116 596 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 RPIAP49247 311 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 EPHB1P54762 984 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 CNGA3Q16281 694 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 PRRT3Q5FWE3 981 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 TPRG1LQ5T0D9 272 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 RFX6Q8HWS3 928 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 SCG3Q8WXD2 468 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 APOLD1Q96LR9 279 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 COQ10AQ96MF6 247 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 TDRD1Q9BXT4 1180 aaKnown RBP17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 WDR26Q9H7D7 661 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 KLQ9UEF7 1012 aa17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 EPN1Q9Y6I3 576 aaPredicted RBP17.78■□□□□ 0.44
SHKBP1-204ENST00000594862 BAHCC1Q9P281 2608 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 TTC24A2A3L6 582 aaPredicted RBP17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 TNFRSF10CO14798 259 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 FZD6O60353 706 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 MAP3K6O95382 1288 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 PYGLP06737 847 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 ANXA6P08133 673 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 GIMD1P0DJR0 217 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 CTSEP14091 401 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 TEAD1P28347 426 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 HK3P52790 923 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 LVRNQ6Q4G3 990 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 KATNAL2Q8IYT4 538 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 PDCD7Q8N8D1 485 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 DTD2Q96FN9 168 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 RBM41Q96IZ5 413 aaKnown RBP17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 NSMCE3Q96MG7 304 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 OLFM3Q96PB7 478 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 LRRC61Q9BV99 259 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 DOLKQ9UPQ8 538 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 ALG6Q9Y672 507 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 DGKBQ9Y6T7 804 aa17.77■□□□□ 0.44
SHKBP1-204ENST00000594862 NPIPB15A6NHN6 443 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 GOLGA6L6A8MZA4 724 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 MTSS1O43312 755 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 HLA-DQB2P05538 268 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 JUPP14923 745 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 TGM2P21980 687 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 TRIM23P36406 574 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 SRP54P61011 504 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 SEMG2Q02383 582 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 DSC2Q02487 901 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 AP1B1Q10567 949 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 SLC10A2Q12908 348 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 SLC14A2Q15849 920 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 TAZQ16635 292 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 ENPP7Q6UWV6 458 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 GKN2Q86XP6 184 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 HID1Q8IV36 788 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 RBFAQ8N0V3 343 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 PIH1D2Q8WWB5 315 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 NAT6Q93015 286 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 RNF25Q96BH1 459 aaPredicted RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 ADGRE3Q9BY15 652 aa17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 CCDC86Q9H6F5 360 aaKnown RBP17.76■□□□□ 0.43
SHKBP1-204ENST00000594862 PHPT1Q9NRX4 125 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms