RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RBP1P09455 135 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 RPL9P32969 192 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 CD86P42081 329 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 SERPINH1P50454 418 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 LPIN1Q14693 890 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 PITRM1Q5JRX3 1037 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 GPR158Q5T848 1215 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 KLHL35Q6PF15 583 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 TMEM207Q6UWW9 146 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 TFAP2DQ7Z6R9 452 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 RTL3Q8N8U3 475 aaKnown RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 OR6P1Q8NGX9 317 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 ABTB1Q969K4 478 aaPredicted RBP16.55■□□□□ 0.24
LIG1-206ENST00000594067 TMEM79Q9BSE2 394 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 SPAG4Q9NPE6 437 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 ZNF510Q9Y2H8 683 aa16.55■□□□□ 0.24
LIG1-206ENST00000594067 OR51F1A6NGY5 319 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 MAGEB3O15480 346 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 CDKN2DP55273 166 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 LPCAT2Q7L5N7 544 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 SCD5Q86SK9 330 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 PIM3Q86V86 326 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 OR13J1Q8NGT2 312 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 CALML6Q8TD86 181 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 EXT2Q93063 718 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 PKMYT1Q99640 499 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 KATNAL1Q9BW62 490 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 SLC25A51Q9H1U9 297 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 SMOC2Q9H3U7 446 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 SARDHQ9UL12 918 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 MYRFQ9Y2G1 1151 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 VWA7Q9Y334 891 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 J3KR12 359 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 PLOD2O00469 737 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 GRIK1P39086 918 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 ARSDP51689 593 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 MAP2K5Q13163 448 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 TMED1Q13445 227 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 ACAP2Q15057 778 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 FSCN1Q16658 493 aaKnown RBP16.54■□□□□ 0.24
LIG1-206ENST00000594067 MTX3Q5HYI7 312 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 AFMIDQ63HM1 303 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 CYHR1Q6ZMK1 362 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 SCML4Q8N228 414 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 HSPBAP1Q96EW2 488 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 TSPAN17Q96FV3 270 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 UBXN10Q96LJ8 280 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 PPP1R2P1Q96PQ5 205 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
LIG1-206ENST00000594067 MRPL40Q9NQ50 206 aaKnown RBP16.54■□□□□ 0.24
LIG1-206ENST00000594067 CROTQ9UKG9 612 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 TRPV2Q9Y5S1 764 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 SQORQ9Y6N5 450 aa16.54■□□□□ 0.24
LIG1-206ENST00000594067 NRP2O60462 931 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 SRP72O76094 671 aaKnown RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 NME5P56597 212 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 PURAQ00577 322 aaKnown RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 DSC2Q02487 901 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 IHHQ14623 411 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 HMBOX1Q6NT76 420 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 TAF2Q6P1X5 1199 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 TOP1MTQ969P6 601 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 GFM2Q969S9 779 aaKnown RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 C3orf30Q96M34 536 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 CIB1Q99828 191 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 PNPLA3Q9NST1 481 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 MARCH4Q9P2E8 410 aaPredicted RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 CD300AQ9UGN4 299 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 GIT1Q9Y2X7 761 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 FNDC1Q4ZHG4 1894 aaPredicted RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 TCRBV3S1A0A5B6 114 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 F8W810 466 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 SLC4A1P02730 911 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 CDH13P55290 713 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 CACNB2Q08289 660 aaPredicted RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 SLC10A7Q0GE19 358 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 C6orf10Q5SRN2 563 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 MORN1Q5T089 497 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 ZNF354CQ86Y25 554 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 CILP2Q8IUL8 1156 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 MIPOL1Q8TD10 442 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 HDAC10Q969S8 669 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 PABPC5Q96DU9 382 aaKnown RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 RANBP9Q96S59 729 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 UHRF1Q96T88 793 aaPredicted RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 SLC25A23Q9BV35 468 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 TRIM62Q9BVG3 475 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 NOL11Q9H8H0 719 aaKnown RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 CRYL1Q9Y2S2 319 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 KCTD3Q9Y597 815 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 A0A1W2PQH9 124 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 MYADML2A6NDP7 307 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 ZNF839A8K0R7 811 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 HTRA2O43464 458 aaPredicted RBP16.53■□□□□ 0.24
LIG1-206ENST00000594067 PEX11BO96011 259 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 OR4Q2P0C623 313 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 IMPDH1P20839 514 aa16.53■□□□□ 0.24
LIG1-206ENST00000594067 SLC7A1P30825 629 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms