RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MOSPD1Q9UJG1 213 aa22.74■■□□□ 1.23
SSBP4-203ENST00000593641 SPTA1P02549 2419 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 B4DGG1 531 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 PDE2AO00408 941 aaPredicted RBP22.73■■□□□ 1.23
SSBP4-203ENST00000593641 TNFRSF10CO14798 259 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 PRPSAP2O60256 369 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 HOXC4P09017 264 aaPredicted RBP22.73■■□□□ 1.23
SSBP4-203ENST00000593641 PNLIPP16233 465 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 SCNN1BP51168 640 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 RENBPP51606 427 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 AP1S1P61966 158 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 ARHGEF7Q14155 803 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 TSR1Q2NL82 804 aaKnown RBP22.73■■□□□ 1.23
SSBP4-203ENST00000593641 C14orf28Q4W4Y0 310 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 AFMIDQ63HM1 303 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 PLEKHA7Q6IQ23 1121 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 CLEC17AQ6ZS10 378 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 ARHGAP12Q8IWW6 846 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 TMEM159Q96B96 161 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 PEBP4Q96S96 227 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 CYP4F12Q9HCS2 524 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 SEPT3Q9UH03 358 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 ACSL6Q9UKU0 697 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 LOXL2Q9Y4K0 774 aa22.73■■□□□ 1.23
SSBP4-203ENST00000593641 B8ZZF3 427 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 ZNF135P52742 658 aaPredicted RBP22.72■■□□□ 1.23
SSBP4-203ENST00000593641 ACOX1Q15067 660 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 OGFOD3Q6PK18 319 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 ARHGAP36Q6ZRI8 547 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 IRF2BP2Q7Z5L9 587 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 SPRED1Q7Z699 444 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 PSTKQ8IV42 348 aaKnown RBP22.72■■□□□ 1.23
SSBP4-203ENST00000593641 NPWQ8N729 165 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 KIAA1524Q8TCG1 905 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 TMEM168Q9H0V1 697 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 MYO6Q9UM54 1294 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 TENM4Q6N022 2769 aa22.72■■□□□ 1.23
SSBP4-203ENST00000593641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.71■■□□□ 1.23
SSBP4-203ENST00000593641 A8MX80 341 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 TRAFD1O14545 582 aaPredicted RBP22.71■■□□□ 1.23
SSBP4-203ENST00000593641 NUDT21O43809 227 aaKnown RBP22.71■■□□□ 1.23
SSBP4-203ENST00000593641 NOBOXO60393 691 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 LIPCP11150 499 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 NFKBIAP25963 317 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 MIPP30301 263 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 TRIM23P36406 574 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 HLTFQ14527 1009 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSBP4-203ENST00000593641 ZNF235Q14590 738 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 TMCO4Q5TGY1 634 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 SPECC1LQ69YQ0 1117 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 APTXQ7Z2E3 356 aaKnown RBP22.71■■□□□ 1.23
SSBP4-203ENST00000593641 LZTR1Q8N653 840 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 FNIP1Q8TF40 1166 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 PSKH2Q96QS6 385 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 CMKLR1Q99788 373 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 ZWILCHQ9H900 591 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 LRIT1Q9P2V4 623 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 RNF215Q9Y6U7 377 aa22.71■■□□□ 1.23
SSBP4-203ENST00000593641 A0A1W2PQ67 120 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 PRSS38A1L453 326 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 NVLO15381 856 aaKnown RBP22.7■■□□□ 1.22
SSBP4-203ENST00000593641 TEX33O43247 280 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 LBRQ14739 615 aaKnown RBP22.7■■□□□ 1.22
SSBP4-203ENST00000593641 MAP9Q49MG5 647 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 PNCKQ6P2M8 343 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 ARFGAP1Q8N6T3 406 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 NUS1Q96E22 293 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 SYT11Q9BT88 431 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 LGR4Q9BXB1 951 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 PHPT1Q9NRX4 125 aaPredicted RBP22.7■■□□□ 1.22
SSBP4-203ENST00000593641 SEPT10Q9P0V9 454 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 B4GALT6Q9UBX8 382 aa22.7■■□□□ 1.22
SSBP4-203ENST00000593641 TMEM191CA6NGB0 347 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 MYCLP1P12525 358 aaPredicted RBP22.69■■□□□ 1.22
SSBP4-203ENST00000593641 GM2AP17900 193 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 ITIH1P19827 911 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 HCAR3P49019 387 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 ZFP36L1Q07352 338 aaKnown RBP22.69■■□□□ 1.22
SSBP4-203ENST00000593641 TGIF1Q15583 401 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 PHF19Q5T6S3 580 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 USP53Q70EK8 1073 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 CCL4L1Q8NHW4 92 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 PDCD6IPQ8WUM4 868 aaKnown RBP22.69■■□□□ 1.22
SSBP4-203ENST00000593641 ZNF599Q96NL3 588 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 GBP4Q96PP9 640 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 CARS2Q9HA77 564 aaKnown RBP22.69■■□□□ 1.22
SSBP4-203ENST00000593641 KCTD5Q9NXV2 234 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 SCINQ9Y6U3 715 aa22.69■■□□□ 1.22
SSBP4-203ENST00000593641 MYO18BQ8IUG5 2567 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 AGRPO00253 132 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 SOCS5O75159 536 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 ATP1A3P13637 1013 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 HSPA9P38646 679 aaKnown RBP22.68■■□□□ 1.22
SSBP4-203ENST00000593641 SLC10A7Q0GE19 358 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 DPYSQ14117 519 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 NCAPHQ15003 741 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 ASIC2Q16515 512 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 SFTPA2Q8IWL1 248 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 BBS5Q8N3I7 341 aa22.68■■□□□ 1.22
SSBP4-203ENST00000593641 SGF29Q96ES7 293 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms